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Resonant Fractal Nature Theory — a mathematical framework for coherent patterns on graph-coupled networks.

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© 2026 TNFR project — MIT licensed.DOI 10.5281/zenodo.17602860
docs
grammar
PHYSICS_VERIFICATION.md
API_CONTRACTS.mdCANONICAL_OZ_SEQUENCES.mdEMPIRICAL_CONFRONTATION_EEG.mdREADME.mdSTRUCTURAL_FIELDS_TETRAD.mdSTRUCTURAL_INTERFACE_THEORY.md
theory
APPLIED_STRUCTURAL_ANALYSIS.mdCATALOG_TYPE_HYGIENE_PROGRAMME.mdDISSIPATIVE_AND_OPEN_SYSTEMS.mdEMERGENT_ONTOLOGY.mdEXTENDED_FIELDS_AND_DERIVED_QUANTITIES.mdFUNDAMENTAL_THEORY.mdGAUGE_SYMMETRY_AND_UNIFICATION.mdGLOSSARY.mdMATHEMATICAL_DYNAMICS_BASIS.mdMINIMAL_STRUCTURAL_DEGREES.mdNUCLEUS_A_PRIME_LADDER_ATLAS.mdNUCLEUS_B_EQUIVARIANCE_OBSTRUCTIONS.mdPHYSICAL_REGIME_CORRESPONDENCES.mdREADME.mdREMESH_INFINITY_DERIVATION.mdSTRUCTURAL_CONSERVATION_THEOREM.mdSTRUCTURAL_OPERATORS.mdSTRUCTURAL_STABILITY_AND_DYNAMICS.mdTNFR_BSD_RESEARCH_NOTES.mdTNFR_HODGE_RESEARCH_NOTES.mdTNFR_NAVIER_STOKES_RESEARCH_NOTES.mdTNFR_NUMBER_THEORY.mdTNFR_P_VS_NP_RESEARCH_NOTES.mdTNFR_RIEMANN_RESEARCH_NOTES.mdTNFR_VARIATIONAL_PRINCIPLE.mdTNFR_YANG_MILLS_RESEARCH_NOTES.mdTNFR.pdfUNIFIED_GRAMMAR_RULES.md
factorization-lab
analysis
analyze_patterns.pycertificate_manifest.py
benchmarks
benchmark_analysis.pybenchmark_expansion_suite.pyfull_spectrum_factorization.pypaley_gap_extended.pypaley_gap_smoke.pytest_benchmark_suite.py
demos
experiment_contexts
exp_0b1663cd19b7.jsonexp_0bf0054b7474.jsonexp_75a4c8ca616a.jsonexp_848ee0fd1857.jsonexp_f6fe00562193.jsonexp_fdf3da424e1e.json
failure_telemetry_batch.pyfeedback_integration_demo.pyintegration_demo_snapshots.dbseed_management_integration_demo.pysnapshot_integration_demo.pytrajectory_143.jsontrajectory_77.jsontrajectory_89.jsontrajectory_91.jsontrajectory_97.json
docs
FACTORING_PLAYBOOK.mdFALSE_POSITIVE_TEST_SUITE.mdOPERATOR_CERTIFICATES.mdROADMAP.mdSPECTRAL_ROUTE.md
experiment_contexts
exp_cebe1d9e7d8e.json
notebooks
spectral_history.ipynb
scripts
run_false_positive_tests.py
tests
run_false_positive_test_suite.pytest_cli.pytest_false_positive_methodology.pytest_false_positive_verifier.pytest_feedback_integration.pytest_partitioning.pytest_seed_management.pytest_self_opt_support.pytest_snapshot_system.pytest_spectral_paley.pytest_verification_robustness.py
tnfr_factorization
__init__.pyapi.pycli.pyfailure_telemetry.pyfeedback_adapter.pyfeedback_integration.pypartitioning.pyself_opt_support.pyspectral_paley.py
demo_snapshots.dbLICENSE_SNAPSHOT.mdPACKAGE_SUMMARY.mdREADME.mdseed_management.pysnapshot_system.pytest_certificate_hashing.pytest_installation.pyverification_trajectory_77.json
benchmarks
analyze_tetrad_universality.pyb0star_alpha_canonical_product_graphs.pybenchmark_optimization_tracks.pybenchmark_utils.pyboundary_vibration.pybridge_primes_riemann.pychiral_involution.pycli_utils.pycoherence_projector_sense_index.pycommutant_bridge.pycomposition_arithmetic.pyconfinement_zones_test.pyconservation_law_validation.pydirected_paley_bridge.pyemergent_arithmetic_pulse.pyemergent_atom_dynamics.pyemergent_atomic_shells.pyemergent_base_dimension.pyemergent_dimension_dynamics.pyemergent_fractal_pulse.pyemergent_fractal_simplex_dimension.pyemergent_integers_symmetry.pyemergent_musical_nfr.pyemergent_nfr_geometry.pyemergent_nfr_where.pyemergent_rationals.pyemergent_rhythm.pyemergent_screening.pyemergent_shell_cardinals.pyemergent_shell_ordering.pyemergent_simplex_dimension.pyemergent_substrate_symmetry.pyequivariance_wall.pyexternal_phase_gate_validation.pyfield_methods_battery.pygolden_residue_remesh_bridge.pyintegrated_force_regime_study.pyinverse_spectrum_to_symmetry.pyk_phi_safety_demo.pykuramoto_farey_bridge.pymissing_piece_bridge.pymultichannel_interface_benchmark.pynavier_stokes_recipe_bridge.pynodal_propagator_residue_bridge.pyns_moment_hierarchy_cascade.pyoperational_irreducibility.pypaley_bridge.pyphase_curvature_investigation.pyphase_wall.pyphi_s_confinement_investigation.pyprimes_as_consequence.pypulse_phase_coherence_budget.pyREADME.mdremesh_infinity_riemann_baseline.pyremesh_infinity_riemann_composed.pyremesh_infinity_riemann_modified_graph.pyremesh_infinity_riemann_operator.pyremesh_infinity_riemann_spectral_basis.pyremesh_infinity_riemann_spectral_robustness.pyremesh_infinity_riemann_spectral.pyresidue_phase_vs_riemann.pystructural_interface_benchmark.pytemporal_interface_benchmark.pytetrad_results_aggregate.pyu2_destabilization_irreversibility.pyuniversality_clusters.pyxi_c_fast_experiment.py
primality-test
benchmarks
comprehensive_benchmark.py
docs
ADVANCED_INTEGRATION.mdmathematical_foundation.mdperformance_analysis.md
examples
advanced_examples.pybasic_usage.py
tnfr_primality
__init__.py__main__.pyadvanced_cli.pyadvanced_core.pycli.pyconstants.pycore.pyoptimized.py
MANIFEST.inPACKAGE_SUMMARY.mdREADME.mdRELEASE_NOTES_v1.0.mdsetup.pytest_installation.py
tests
core_physics
__init__.pytest_conservation_laws.pytest_delta_nfr_computation_paths.pytest_delta_nfr.pytest_dispersion_coherence_sign_invariance.pytest_emergent_constants_guard.pytest_lyapunov_operators.pytest_nodal_equation.pytest_structural_triad.py
data
replay_manifests
sample_run
_manifest_summary.json_manifest.json_partition_files.txt.gz
self_opt_validation
seed_alpha
paley.json
seed_beta
integration.json
seed_gamma
unknown.json
self_optimization
test_run
partitioned
test_run
test_run_p0.jsontest_run_p1.json
_manifest_summary.json_manifest.json
engines
test_pattern_discovery_manifest.pytest_self_optimization_engine.py
mathematics
__init__.pytest_autodiff.pytest_backends.pytest_dissipative_dynamics.pytest_epi.pytest_factory_patterns.pytest_metrics.pytest_navier_stokes_refounded.pytest_number_theory_canonical.pytest_operators.pytest_residue_networks.pytest_riemann_nodal_pulse.pytest_riemann_pulse_coherence.pytest_spaces.pytest_transforms.pytest_validator.py
operators
test_canonical_operators_modern.pytest_grammar_canon.pytest_grammar_canonical_consistency.pytest_grammar_dynamics.pytest_operator_contracts.pytest_operator_strategies.py
parallel
test_fractal_partition_manifest.py
physics
test_conservation_gauge_unification.pytest_dissipative_conservation.pytest_emergent_chemistry.pytest_field_cache_invalidation.pytest_gauge.pytest_phase_transition.pytest_signatures.pytest_spectral_conservation.pytest_structural_diffusion.pytest_structural_integrity.pytest_symplectic_substrate.pytest_tetrad_bounds.pytest_variational.pytest_yang_mills_closure.pytest_yang_mills_derivability.pytest_yang_mills_scaling.pytest_yang_mills_structural_gap.pytest_yang_mills_u6_sweep.py
scripts
test_run_self_opt_validation.pytest_run_self_optimization.py
sdk
__init__.pytest_simple_advanced.py
__init__.pyconftest.pyREADME.mdtest_breast_cancer_phase_gate_demo.pytest_classical_mechanics.pytest_distributed_fft.pytest_external_phase_gate_validation.pytest_factorization_entrypoint.pytest_multichannel_interface.pytest_nodal_optimizer.pytest_phase_gate_api.pytest_replay_register_manifest.pytest_signal_confrontation.pytest_structural_interface_api.pytest_structural_interface_baselines.pytest_structural_interface_benchmark.pytest_temporal_interface.pytest_vectorized_coherence_length_regression.pytest_wine_quality_phase_gate_demo.pyutils.py
examples
01_foundations
01_hello_world.py02_musical_resonance.py03_network_formation.py04_operator_sequences.py05_coherence_evolution.py06_network_topologies.py07_phase_transitions.py08_emergent_phenomena.py09_visualization_suite.py10_simplified_sdk_showcase.py
02_physics_regimes
11_classical_limit_comparison.py115_operator_contract_audit.py12_classical_mechanics_demo.py13_quantum_mechanics_demo.py14_uncertainty_and_interference.py15_train_crossing_demo.py17_conservation_law_demo.py26_gauge_structure_demo.py27_variational_principle_demo.py28_dissipative_systems_demo.py29_lyapunov_stability_demo.py30_self_optimization_demo.py31_mathematical_constants_basis.py33_complex_field_unification.py34_conservation_protocol_suite.py35_tetrad_irreducibility.py36_grammar_violation_detector.py37_operator_tetrad_synergy.py38_grammar_energy_landscape.py39_nodal_equation_decomposition.py
03_riemann_zeta
157_nodal_pulse_phase_attack.py41_von_mangoldt_zeta_demo.py42_riemann_zeros_as_resonances.py43_prime_ladder_hamiltonian_demo.py44_weil_explicit_formula_demo.py45_li_keiper_demo.py46_weil_tnfr_positivity_demo.py47_alpha_sweep_demo.py48_admissible_family_sweep_demo.py49_nodeaware_gauge_sweep_demo.py50_uniform_coercivity_demo.py51_adaptive_coercivity_demo.py52_paley_gap_coercivity_demo.py53_lyapunov_spectral_positivity_demo.py54_hilbert_polya_demo.py55_structural_zero_density_demo.py56_spectral_emergence_demo.py57_admissible_rescaling_demo.py58_oscillatory_correction_demo.py
04_riemann_L_twisted
59_dirichlet_l_function_demo.py60_dirichlet_l_continuation_demo.py61_dirichlet_l_hamiltonian_demo.py62_dirichlet_weil_explicit_formula_demo.py63_dirichlet_li_keiper_demo.py64_twisted_weil_positivity_demo.py65_twisted_alpha_sweep_demo.py66_twisted_admissible_family_sweep_demo.py67_twisted_nodeaware_gauge_sweep_demo.py68_twisted_hermite_family_demo.py69_twisted_coercivity_uniform_demo.py70_twisted_paley_gap_coercivity_demo.py71_twisted_lyapunov_spectral_demo.py72_twisted_hilbert_polya_demo.py73_twisted_structural_zero_density_demo.py74_twisted_spectral_emergence_demo.py75_twisted_admissible_rescaling_demo.py76_twisted_oscillatory_correction_demo.py
05_type_hygiene
77_remesh_infinity_residue_split_demo.py78_nuf_type_signature_demo.py79_epi_type_signature_demo.py80_phi_type_signature_demo.py81_dnfr_type_signature_demo.py82_remesh_window_type_signature_demo.py83_delta_phi_max_type_signature_demo.py84_coupling_weights_type_signature_demo.py85_tetrad_closure_signature_demo.py86_currents_closure_signature_demo.py87_aggregates_closure_signature_demo.py88_urules_consistency_signature_demo.py89_operator_catalog_discipline_signature_demo.py
06_navier_stokes
158_navier_stokes_two_face_refounded.py
07_number_theory
100_prime_families_orbits.py101_numbers_as_coupled_network.py102_nodal_flow_primes_equilibria.py116_nuf_emergent_prime_visibility.py146_primality_grammatical_inertness.py147_numbers_as_free_monoid_words.py148_capacity_arm_carries_von_mangoldt.py149_p14_is_the_capacity_arm_operator.py153_structural_frequency_rank_cyclotomy.py40_arithmetic_number_theory.py94_generative_number_construction.py95_primes_from_spectral_waves.py96_spectral_vibration_of_coherence.py97_goldbach_additive_multiplicative.pyemergent_chemistry_particles_demo.py
08_emergent_geometry
103_emergent_substrate_meets_riemann.py106_per_node_polarization_geometry.py107_orthogonal_structure_emergent_geometry.py108_emergent_field_generating_structure.py112_structure_predicts_coherence_flow.py113_overdamped_projection_bridge.py114_substrate_conserved_quantities.py117_emergent_geometry_residue_graph.py118_emergent_vs_classical_operator.py119_phase_sector_directed_residue.py120_symmetry_wall_substrate_vs_spectrum.py121_canonical_symmetry_break_negative.py122_factorization_phase_sector.py123_symmetry_sector_decomposition.py124_emergent_metric_fractal_consistency.py125_node_is_the_emergent_substrate.py126_two_layers_base_fiber.py127_base_is_emergent_not_imposed.py128_base_substrate_coemergence.py129_spectral_gap_base_fiber_clock.py130_operators_break_substrate_charges.py131_coemergent_loop_convergence.py132_geometric_phase_holonomy.py133_psi_topological_defects.py134_spectral_dimension_heat_kernel.py135_arrow_of_time_h_theorem.py136_heat_kernel_coefficients.py137_synchronization_transition.py138_structure_frequency_synchronization.py139_grammar_formal_language.py140_grammar_automaton.py141_grammar_rule_decomposition.py142_grammar_operator_quotient.py143_glyphic_function_sublanguage.py144_branching_combinator.py145_syntactic_monoid_starfree.py150_emergent_grammatical_pattern_parry.py151_grammar_in_emergent_geometry.py152_operator_contract_tetrahedron.py154_conductor_annotated_qr_spectrum.py155_ontological_position_of_numbers.py156_emergence_directness_law.py98_emergent_symplectic_substrate.py99_structural_diffusion.pyunified_fields_showcase.py
09_millennium
109_p_vs_np_coherence_synthesis.py110_bsd_rank_structural_pressure.py111_hodge_discrete_and_honest_gap.py
10_applications
159_empirical_confrontation_pipeline.py90_phase_gate_monitor_demo.py91_breast_cancer_phase_gate_demo.py92_wine_quality_phase_gate_demo.py93_structural_interface_demo.pypytorch_cuda_demo.py
README.md
scripts
replay
__init__.pyregister_manifest.py
__init__.pyREADME.mdrebuild_failure_manifest.pyrun_reproducible_benchmarks.pyrun_self_opt_validation.pyrun_self_optimization.pytnfr_is_prime.pyvalidate_conservation_law.pyverify_internal_references.py
src
core
__init__.pyevaluation.py
tnfr
backends
__init__.pyjax_backend.pynumpy_backend.pyoptimized_numpy.pyREADME.mdtorch_backend.py
cli
__init__.py__init__.pyiarguments.pyarguments.pyiexecution.pyexecution.pyiinteractive_validator.pyREADME.mdutils.pyutils.pyi
compat
__init__.pydataclass.pyjsonschema_stub.pymatplotlib_stub.pynumpy_stub.pyREADME.md
config
__init__.py__init__.pyiconstants.pyconstants.pyidefaults_core.pydefaults_init.pydefaults_metric.pydefaults.pyfeature_flags.pyfeature_flags.pyiglyph_constants.pyoperator_names.pyoperator_names.pyiphysics_derivation.pyprecision_modes.pypresets.pypresets.pyiREADME.mdsecurity.pythresholds.pytnfr_config.py
constants
__init__.py__init__.pyialiases.pyaliases.pyicanonical.pymetric.pymetric.pyioperational.py
core
__init__.pycontainer.pydefault_implementations.pyexceptions.pyinterfaces.pyREADME.md
dynamics
__init__.py__init__.pyiadaptation.pyadaptation.pyiadaptive_sequences.pyadaptive_sequences.pyiadelic.pyadvanced_cache_optimizer.pyadvanced_fft_arithmetic.pyaliases.pyaliases.pyibifurcation.pycache_aware_fft_engine.pycanonical.pycanonical.pyicomputational_hub.pycoordination.pycoordination.pyidistributed_fft.pydnfr.pydnfr.pyidynamic_limits.pyemergent_centralization.pyemergent_integration_engine.pyfeedback.pyfeedback.pyifft_backend.pyfft_cache_coordinator.pyfft_dispatchers.pyfft_engine.pyfft_workers.pyfused_dnfr.pyhomeostasis.pyhomeostasis.pyiintegrators.pyintegrators.pyilearning.pylearning.pyimetabolism.pymulti_modal_cache.pynbody_tnfr.pynbody.pynodal_optimizer.pyoptimization_orchestrator.pypropagation.pyREADME.mdruntime.pyruntime.pyisampling.pysampling.pyiselectors.pyselectors.pyiself_optimizing_engine.pyspectral_structural_fusion.pystructural_cache.pystructural_clip.pysymplectic.pyunified_backend.pyunified_mathematical_cache_orchestrator.py
engines
computation
__init__.pyfft_engine.pyunified_fft_engine.pyunified_gpu_system.py
constants
__init__.pycanonical.pyoperational.py
integration
__init__.pyemergent_integration.py
pattern_discovery
__init__.pymathematical_patterns.pymulti_modal_cache.py
self_optimization
__init__.pyengine.py
__init__.pyREADME.md
errors
__init__.pycontextual.py
factorization
__init__.py
flatten
README.md
gamma
README.md
glyph_history
README.md
glyph_runtime
README.md
immutable
README.md
initialization
README.md
io
README.md
math
__init__.pyfields_symbolic.pygrammar_validators.pyoptimizer.pyREADME.mdsymbolic.py
mathematics
__init__.pybackend.pybackend.pyidynamics.pydynamics.pyiepi.pyepi.pyigenerators.pygenerators.pyiliouville.pymetrics.pymetrics.pyinumber_theory.pyoperators_factory.pyoperators_factory.pyioperators.pyoperators.pyioptimized_primality.pyprojection.pyprojection.pyiREADME.mdruntime.pyruntime.pyispaces.pyspaces.pyispectral.pytransforms.pytransforms.pyiunified_cache.pyunified_numerical.pyzeta.py
metrics
__init__.py__init__.pyibuffer_cache.pybuffer_cache.pyicache_utils.pycoherence.pycoherence.pyicommon.pycommon.pyicore.pycore.pyidiagnosis.pydiagnosis.pyiemergence.pyexport.pyexport.pyiglyph_timing.pyglyph_timing.pyilearning_metrics.pylearning_metrics.pyilocal_coherence.pyphase_coherence.pyphase_compatibility.pyREADME.mdreporting.pyreporting.pyisense_index.pysense_index.pyitelemetry.pytetrad.pytrig_cache.pytrig_cache.pyitrig.pytrig.pyi
multiscale
__init__.pyhierarchical.pyREADME.md
navier_stokes
__init__.pyconservative_face.pyoperator.py
node
README.md
observers
README.md
operators
network_analysis
__init__.pysource_detection.py
postconditions
__init__.pymutation.py
preconditions
__init__.pycoherence.pydissonance.pyemission.pymutation.pyreception.pyresonance.py
strategies
__init__.pydefaults.pygpu_strategies.pystrategy.py
__init__.py__init__.pyialgebra.pycanonical_patterns.pycascade.pycoherence.pycontraction.pycoupling.pycycle_detection.pydefinitions_base.pydefinitions.pydefinitions.pyidissonance.pyemission.pyexpansion.pygrammar_application.pygrammar_canon.pygrammar_context.pygrammar_core.pygrammar_dynamics.pygrammar_error_factory.pygrammar_memoization.pygrammar_patterns.pygrammar_telemetry.pygrammar_types.pygrammar_u6.pygrammar_validate.pygrammar.pygrammar.pyihamiltonian.pyhealth_analyzer.pyintrospection.pyjitter.pyjitter.pyilifecycle.pymetabolism.pymetrics_basic.pymetrics_core.pymetrics_network.pymetrics_structural.pymetrics_u6.pymetrics.pymutation.pynodal_equation.pyoperator_contracts.pypattern_detection.pypatterns.pyREADME.mdreception.pyrecursivity.pyregistry.pyregistry.pyiremesh.pyremesh.pyiresonance.pyself_organization.pysilence.pystructural_units.pytransition.py
parallel
__init__.pyauto_scaler.pydistributed.pyengine.pymonitoring.pypartitioner.pyREADME.md
performance
guardrails.py
physics
__init__.py_helpers.pycalibration.pycanonical.pycell.pyclassical_mechanics.pyconservation_gauge_unification.pyconservation.pydissipative_conservation.pyemergent_chemistry.pyemergent_particles.pyextended.pyfields.pygauge.pyintegrity.pyinteractions.pylife.pylyapunov.pypatterns.pyphase_transition.pyquantum_mechanics.pyREADME.mdsignatures.pyspectral_conservation.pyspectral_metrics.pystructural_diffusion.pysymplectic_substrate.pytelemetry.pyunified.pyvariational.pyvectorized_ops.py
primality
__init__.py
recipes
__init__.pycookbook.pyREADME.md
riemann
__init__.pyadmissible_family_sweep.pyadmissible_rescaling.pyaggregates_closure_signature.pyalpha_sweep.pyanalytic_continuation_dirichlet.pyanalytic_continuation.pycoercivity_uniform.pycoupling_weights_type_signature.pycurrents_closure_signature.pydelta_phi_max_type_signature.pydirichlet_l.pydnfr_type_signature.pyepi_type_signature.pyhilbert_polya.pyli_keiper.pylyapunov_spectral_positivity.pynodal_pulse.pynodeaware_gauge_sweep.pynuf_type_signature.pyoperator_catalog_discipline_signature.pyoperator.pyoscillatory_correction.pypaley_gap_coercivity.pyphi_type_signature.pyprime_ladder_hamiltonian.pypulse_coherence.pyremesh_infinity_residue_split.pyremesh_window_type_signature.pyspectral_emergence.pystructural_zero_density.pytelemetry.pytetrad_closure_signature.pytwisted_admissible_family_sweep.pytwisted_admissible_rescaling.pytwisted_alpha_sweep.pytwisted_coercivity_uniform.pytwisted_hermite_family.pytwisted_hilbert_polya.pytwisted_li_keiper.pytwisted_lyapunov_spectral_positivity.pytwisted_nodeaware_gauge_sweep.pytwisted_oscillatory_correction.pytwisted_paley_gap_coercivity.pytwisted_prime_ladder_hamiltonian.pytwisted_spectral_emergence.pytwisted_structural_zero_density.pytwisted_weil_explicit_formula.pytwisted_weil_positivity.pyurules_consistency_signature.pyvon_mangoldt.pyweil_explicit_formula.pyweil_positivity.py
schemas
__init__.pygrammar.jsonREADME.md
sdk
__init__.py__init__.pyiadaptive_system.pyadaptive_system.pyibuilders.pybuilders.pyifluent.pyfluent.pyiREADME.mdself_opt.pysimple.pytemplates.pytemplates.pyiutils.py
security
__init__.pycrypto.pydatabase.pyREADME.mdsubprocess.pyvalidation.py
sequencing
__init__.pypatterns.pyREADME.md
services
__init__.pyorchestrator.pyREADME.md
sparse
__init__.pyREADME.mdrepresentations.py
structural
README.md
telemetry
__init__.pycache_metrics.pycache_metrics.pyiconstants.pynu_f.pynu_f.pyiREADME.mdunified_telemetry_system.pyverbosity.pyverbosity.pyi
tools
__init__.pydomain_templates.pyREADME.mdsequence_generator.pytnfr_is_prime_cli_optimized.pytnfr_is_prime_cli.py
topology
__init__.pyasymmetry.pyREADME.md
utils
cache_layers.pycache.pycache.pyicallbacks.pycallbacks.pyichunks.pychunks.pyidata.pydata.pyifast_diameter.pygraph.pygraph.pyiinit.pyinit.pyiio.pyio.pyinumeric.pynumeric.pyiREADME.mdtopology.pyunified_cache.py
validation
__init__.py__init__.pyiaggregator.pybase.pycompatibility.pycompatibility.pyiconfig.pygraph.pygraph.pyihealth.pyinput_validation.pyinterface_baselines.pyinvariants.pymultichannel_interface.pyphase_gate.pyREADME.mdrules.pyrules.pyiruntime.pyruntime.pyisequence_validator.pysignal_confrontation.pysoft_filters.pysoft_filters.pyispectral.pyspectral.pyistructural_interface.pytemporal_interface.pyunified_validation_system.pyvalidator.pywindow.pywindow.pyi
visualization
__init__.pycascade_viz.pyhierarchy.pyREADME.mdsequence_plotter.py
yang_mills
__init__.pyclosure.pyderivability.pyscaling.pystructural_gap.pyu6_sweep.py
__init__.py__init__.pyi_compat.py_version.py_version.pyialias.pyalias.pyibackend_config.pycache.pycache.pyiexecution.pyexecution.pyiflatten.pyflatten.pyigamma.pygamma.pyiglyph_history.pyglyph_history.pyiglyph_runtime.pyglyph_runtime.pyiimmutable.pyimmutable.pyiinitialization.pyinitialization.pyiio.pyio.pyilocking.pylocking.pyinode.pynode.pyiobservers.pyobservers.pyiontosim.pyontosim.pyipy.typedrng.pyrng.pyisecure_config.pyselector.pyselector.pyisense.pysense.pyistructural.pystructural.pyitokens.pytokens.pyitrace.pytrace.pyitypes.pytypes.pyiunits.pyunits.pyi
tetrad_evaluator.py
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FILE: benchmarks/golden_residue_remesh_bridge.py

golden_residue_remesh_bridge.py

Camino 16 -- the golden orbit meets the N15 R-infinity projector.

WHAT THIS IS (and is NOT)

This is a CONSISTENCY demonstration, not a mathematical advance. It does NOT prove anything new and does NOT move G4 = RH. It feeds the dynamical objects of Camino 15 (kuramoto_farey_bridge.py) through the ONE canonical TNFR object that is an actual proven theorem -- the N15 REMESH-infinity orthogonal projector R_infinity (theory/REMESH_INFINITY_DERIVATION.md, Branch A) -- and checks where they land. The point is to turn Camino 15's deliberately SOFT analogy ("phi never locks ~ the wall residue") into a PRECISE statement, and to expose the analogy's honest LIMIT.

THE CANONICAL OBJECT

N15 proves R_infinity is a bounded self-adjoint orthogonal projection whose range is the resonant Fourier lattice {2 pi m / L} with L = lcm(tau_l, tau_g) = lcm(4, 8) = 8 (the documented canonical pair). The engine implements it as a DFT-bin mask in tnfr.riemann.split_residue_by_remesh_infinity; P50 (examples/77_remesh_infinity_residue_split_demo.py) already used it to show the prime-ladder reconstruction S_TNFR(T) lives in ker(R_infinity) (because {k log p} is incommensurate with the pi-lattice, Baker's theorem).

THE DYNAMICAL OBJECTS

The sine circle map theta_{n+1} = theta_n + Omega - (K/2pi) sin(2pi theta_n) -- the single-node Kuramoto reduction of dEPI/dt = nu_f * DNFR (Camino 15) -- produces orbits with a rotation number rho. We build the real signal cos(2pi theta_n) (demeaned, so the trivially-resonant DC bin is excluded, exactly as P50's S_TNFR is zero-mean) and project it with the canonical R_infinity.

THESIS (all four checks pass; closes NOTHING)

  1. The GOLDEN (quasi-periodic) orbit rho = 1/phi lies in ker(R_infinity): its incommensurate frequency 2pi/phi misses the resonant lattice 2pi m / 8. This is the DYNAMICAL twin of P50's S_TNFR in ker -- the same kernel, reached by a different incommensurate carrier (phi here, log p there).

  2. A REMESH-COMMENSURATE locking (period q | L = 8: rho = 1/2, rho = 1/4) lies in range(R_infinity): all its harmonics sit on the resonant lattice.

  3. HONEST LIMIT. A locking whose period does NOT divide L = 8 (rho = 1/3, period 3) is genuinely LOCKED yet still lands in ker(R_infinity). So Camino 15's lock/no-lock dichotomy does NOT map one-to-one onto N15's range/ker split: R_infinity's lattice is COARSER than the full Farey set of lockings. range(R_infinity) is the period-divides-L sub-lattice only; everything else -- un-locked irrationals (phi) AND locked rationals with period coprime-ish to L -- is in the kernel. This SHARPENS the analogy and LIMITS it at once.

  4. Canonical cross-check + scope. The engine's own controls reproduce (sin(2pi T / L) -> range, sin(gamma T) -> ker), and the P50 certificate confirms the prime-ladder S_TNFR in ker. The kernel is large (its complement, the resonant lattice, is measure-zero among all frequencies); it holds BOTH the arithmetic residue S(T) carrier and the golden orbit. Membership in ker(R_infinity) LOCATES the residue; it is NOT a route to RH.

HONEST SCOPE

This closes NOTHING. It makes the Camino-15 / N15 connection precise and exposes its limit. G4 = RH stays OPEN; R and pi remain the assumed substrate. The whole construction lives inside the 13-operator catalog (R_infinity is derivable from REMESH, N15 Branch A); no new operator is introduced.

Run: python benchmarks/golden_residue_remesh_bridge.py

Source Code

python
"""Camino 16 -- the golden orbit meets the N15 R-infinity projector.

WHAT THIS IS (and is NOT)
-------------------------
This is a CONSISTENCY demonstration, not a mathematical advance. It does
NOT prove anything new and does NOT move G4 = RH. It feeds the dynamical
objects of Camino 15 (``kuramoto_farey_bridge.py``) through the ONE
canonical TNFR object that is an actual proven theorem -- the N15
REMESH-infinity orthogonal projector ``R_infinity``
(``theory/REMESH_INFINITY_DERIVATION.md``, Branch A) -- and checks where
they land. The point is to turn Camino 15's deliberately SOFT analogy
("phi never locks ~ the wall residue") into a PRECISE statement, and to
expose the analogy's honest LIMIT.

THE CANONICAL OBJECT
--------------------
N15 proves ``R_infinity`` is a bounded self-adjoint orthogonal projection
whose range is the resonant Fourier lattice ``{2 pi m / L}`` with
``L = lcm(tau_l, tau_g) = lcm(4, 8) = 8`` (the documented canonical pair).
The engine implements it as a DFT-bin mask in
``tnfr.riemann.split_residue_by_remesh_infinity``; P50
(``examples/77_remesh_infinity_residue_split_demo.py``) already used it to
show the prime-ladder reconstruction ``S_TNFR(T)`` lives in
``ker(R_infinity)`` (because ``{k log p}`` is incommensurate with the
pi-lattice, Baker's theorem).

THE DYNAMICAL OBJECTS
---------------------
The sine circle map ``theta_{n+1} = theta_n + Omega - (K/2pi)
sin(2pi theta_n)`` -- the single-node Kuramoto reduction of
``dEPI/dt = nu_f * DNFR`` (Camino 15) -- produces orbits with a rotation
number ``rho``. We build the real signal ``cos(2pi theta_n)`` (demeaned,
so the trivially-resonant DC bin is excluded, exactly as P50's S_TNFR is
zero-mean) and project it with the canonical ``R_infinity``.

THESIS (all four checks pass; closes NOTHING)
---------------------------------------------
1. The GOLDEN (quasi-periodic) orbit ``rho = 1/phi`` lies in
   ``ker(R_infinity)``: its incommensurate frequency ``2pi/phi`` misses the
   resonant lattice ``2pi m / 8``. This is the DYNAMICAL twin of P50's
   ``S_TNFR in ker`` -- the same kernel, reached by a different
   incommensurate carrier (phi here, log p there).

2. A REMESH-COMMENSURATE locking (period ``q | L = 8``: ``rho = 1/2``,
   ``rho = 1/4``) lies in ``range(R_infinity)``: all its harmonics sit on
   the resonant lattice.

3. HONEST LIMIT. A locking whose period does NOT divide ``L = 8``
   (``rho = 1/3``, period 3) is genuinely LOCKED yet still lands in
   ``ker(R_infinity)``. So Camino 15's lock/no-lock dichotomy does NOT map
   one-to-one onto N15's range/ker split: ``R_infinity``'s lattice is
   COARSER than the full Farey set of lockings. ``range(R_infinity)`` is
   the period-divides-L sub-lattice only; everything else -- un-locked
   irrationals (phi) AND locked rationals with period coprime-ish to L --
   is in the kernel. This SHARPENS the analogy and LIMITS it at once.

4. Canonical cross-check + scope. The engine's own controls reproduce
   (``sin(2pi T / L) -> range``, ``sin(gamma T) -> ker``), and the P50
   certificate confirms the prime-ladder ``S_TNFR in ker``. The kernel is
   large (its complement, the resonant lattice, is measure-zero among all
   frequencies); it holds BOTH the arithmetic residue ``S(T)`` carrier and
   the golden orbit. Membership in ``ker(R_infinity)`` LOCATES the residue;
   it is NOT a route to RH.

HONEST SCOPE
------------
This closes NOTHING. It makes the Camino-15 / N15 connection precise and
exposes its limit. ``G4 = RH`` stays OPEN; ``R`` and ``pi``
remain the assumed substrate. The whole construction lives inside the
13-operator catalog (R_infinity is derivable from REMESH, N15 Branch A);
no new operator is introduced.

Run:
    python benchmarks/golden_residue_remesh_bridge.py
"""

from __future__ import annotations

import math
import os
import sys

import numpy as np

_HERE = os.path.dirname(os.path.abspath(__file__))
_SRC = os.path.abspath(os.path.join(_HERE, "..", "src"))
for _p in (_HERE, _SRC):
    if _p not in sys.path:
        sys.path.insert(0, _p)

# Sibling Camino-15 harness: the circle-map dynamics (always present).
from kuramoto_farey_bridge import (  # noqa: E402
    K_SUB,
    PHI_INV,
    circle_map_rho,
    invert_rho,
    sweep_rho,
)

# Canonical N15 R_infinity projector (the subject of this harness).
try:
    from tnfr.riemann import (
        compute_residue_split_certificate,
        split_residue_by_remesh_infinity,
    )

    _HAVE_RINF = True
except Exception:  # pragma: no cover - canonical engine optional
    _HAVE_RINF = False


# --------------------------------------------------------------------------- #
# Constants
# --------------------------------------------------------------------------- #
TAU_L, TAU_G = 4, 8  # documented canonical REMESH pair
LCM_L = math.lcm(TAU_L, TAU_G)  # L = 8: resonant lattice 2*pi*m / L
# 960 = 24 * 40: multiple of L = 8 (mask) AND of lcm(2,3,4) = 12 (clean
# periods for the period-2/3/4 locked orbits, no spectral leakage).
N_SAMPLES = 960
_TRANSIENT = 6000  # discard before sampling the orbit
K_LOCK = 0.9  # near-critical: wide, clean tongues
THRESH = 0.05  # P50 certificate decision threshold
_GAMMA_EM = 0.5772156649015329  # Euler-Mascheroni (non-resonant ctrl)


# --------------------------------------------------------------------------- #
# Helpers
# --------------------------------------------------------------------------- #
def circle_map_orbit(
    omega: float,
    k: float,
    n: int = N_SAMPLES,
    trans: int = _TRANSIENT,
) -> np.ndarray:
    """Demeaned ``cos(2*pi*theta_n)`` signal of the lifted circle map.

    The lift ``theta_n`` grows without wrapping; ``cos(2*pi*theta_n)``
    folds it onto the circle. We subtract the mean so the trivially
    resonant DC bin (k = 0) is excluded -- matching P50, whose S_TNFR is
    a sum of sines (zero mean).
    """
    two_pi = 2.0 * math.pi
    factor = k / two_pi
    theta = 0.0
    for _ in range(trans):
        theta += omega - factor * math.sin(two_pi * theta)
    sig = np.empty(n, dtype=float)
    for j in range(n):
        theta += omega - factor * math.sin(two_pi * theta)
        sig[j] = math.cos(two_pi * theta)
    sig -= sig.mean()
    return sig


def orbit_period(
    sig: np.ndarray,
    max_q: int = 16,
    tol: float = 1e-6,
) -> int:
    """Smallest period ``q <= max_q`` of ``sig`` (0 if quasi-periodic)."""
    m = min(256, sig.size // 2)
    head = sig[:m]
    for q in range(1, max_q + 1):
        if np.max(np.abs(sig[q : q + m] - head)) < tol:
            return q
    return 0


def tongue_centre(
    target: float,
    k: float,
    span: float = 0.05,
    n: int = 4001,
    lock_tol: float = 2e-3,
) -> float:
    """Centre of the Arnold tongue holding ``rho = target`` at coupling k.

    ``invert_rho`` lands on a tongue EDGE (marginal locking, long
    transients); we scan a window around it, keep the locked points
    (``|rho - target| < lock_tol``) and return their median Omega -- a
    robustly INTERIOR, cleanly periodic detuning.
    """
    om0 = invert_rho(target, k)
    lo = max(0.0, om0 - span)
    hi = min(1.0, om0 + span)
    oms = np.linspace(lo, hi, n)
    rhos = sweep_rho(oms, k)
    locked = np.abs(rhos - target) < lock_tol
    if not locked.any():
        return om0
    return float(np.median(oms[locked]))


def range_kernel_fractions(sig: np.ndarray) -> tuple[float, float, str]:
    """Energy fractions of ``sig`` in range / ker of canonical R_infinity.

    Uses the engine's ``split_residue_by_remesh_infinity`` when present;
    otherwise a NumPy DFT-bin-mask fallback identical to the canonical
    construction. Fractions are squared-norm (Parseval) and sum to 1.
    """
    if _HAVE_RINF:
        rng, ker = split_residue_by_remesh_infinity(sig, tau_l=TAU_L, tau_g=TAU_G)
        src = "tnfr.riemann.split_residue_by_remesh_infinity (CANONICAL)"
    else:
        period = math.lcm(TAU_L, TAU_G)
        step = sig.size // period
        mask = np.zeros(sig.size, dtype=bool)
        mask[::step] = True
        spec = np.fft.fft(sig)
        rng = np.real(np.fft.ifft(np.where(mask, spec, 0.0 + 0.0j)))
        ker = sig - rng
        src = "numpy DFT-bin-mask fallback"
    total = float(np.linalg.norm(sig))
    if total <= 0.0:
        return 0.0, 0.0, src
    r = (float(np.linalg.norm(rng)) / total) ** 2
    kf = (float(np.linalg.norm(ker)) / total) ** 2
    return r, kf, src


# --------------------------------------------------------------------------- #
# TEST 1 -- the golden orbit lies in ker(R_infinity)
# --------------------------------------------------------------------------- #
def test_golden_orbit_in_kernel() -> bool:
    print("=" * 78)
    print("TEST 1 -- the golden (quasi-periodic) orbit rho = 1/phi lies")
    print("          in ker(R_infinity): its incommensurate frequency")
    print("          misses the resonant lattice 2*pi*m / 8 (= P50's twin)")
    print("=" * 78)

    om = invert_rho(PHI_INV, K_SUB)
    rho = circle_map_rho(om, K_SUB)
    sig = circle_map_orbit(om, K_SUB)
    q = orbit_period(sig)
    r_frac, k_frac, src = range_kernel_fractions(sig)

    hit = abs(rho - PHI_INV) < 1e-3
    quasi = q == 0  # no small period = quasi-periodic
    in_kernel = r_frac < THRESH

    print(f"  Omega* (rho = 1/phi, K={K_SUB})  : {om:.6f}")
    print(f"  measured rho                  : {rho:.6f} (hit={hit})")
    print(f"  detected period (0=quasi)     : {q}  (quasi={quasi})")
    print(f"  range(R_inf) fraction         : {100.0 * r_frac:7.4f} %")
    print(f"  ker(R_inf)   fraction         : {100.0 * k_frac:7.4f} %")
    print(f"  projector source              : {src}")
    ok = hit and quasi and in_kernel
    msg = (
        ("the golden orbit is in ker(R_inf), the dynamical twin of " "P50's S_TNFR")
        if ok
        else "golden orbit not cleanly in kernel"
    )
    print(f"  VERDICT: {'PASS' if ok else 'FAIL'} -- {msg}")
    print()
    return ok


# --------------------------------------------------------------------------- #
# TEST 2 -- REMESH-commensurate lockings lie in range(R_infinity)
# --------------------------------------------------------------------------- #
def test_commensurate_lockings_in_range() -> bool:
    print("=" * 78)
    print("TEST 2 -- a locking whose period divides L = 8 (rho = 1/2,")
    print("          rho = 1/4) lies in range(R_infinity): every harmonic")
    print("          sits on the resonant lattice")
    print("=" * 78)

    cases = [(1, 2), (1, 4)]  # periods 2 and 4, both | 8
    all_ok = True
    for p, qd in cases:
        target = p / qd
        om = tongue_centre(target, K_LOCK)
        sig = circle_map_orbit(om, K_LOCK)
        q = orbit_period(sig)
        r_frac, k_frac, _ = range_kernel_fractions(sig)
        locked = q == qd
        in_range = r_frac > (1.0 - THRESH)
        ok = locked and in_range
        all_ok = all_ok and ok
        print(
            f"  rho = {p}/{qd}: Omega*={om:.5f} period={q} "
            f"range={100.0 * r_frac:6.2f}% ker={100.0 * k_frac:6.2f}% "
            f"-> {'range' if in_range else 'NOT range'}"
        )
    msg = (
        "commensurate lockings (period | 8) land in range(R_inf)"
        if all_ok
        else "a commensurate locking missed range"
    )
    print(f"  VERDICT: {'PASS' if all_ok else 'FAIL'} -- {msg}")
    print()
    return all_ok


# --------------------------------------------------------------------------- #
# TEST 3 -- HONEST LIMIT: a locked rho=1/3 (period 3 does NOT divide 8)
#           is still in ker(R_infinity); the lattice is coarser
# --------------------------------------------------------------------------- #
def test_lattice_coarser_than_lockings() -> bool:
    print("=" * 78)
    print("TEST 3 -- HONEST LIMIT: rho = 1/3 is genuinely LOCKED (period 3)")
    print("          yet 3 does NOT divide L = 8, so it lands in")
    print("          ker(R_infinity): R_inf's lattice is coarser than the")
    print("          Farey set of lockings (analogy is partial)")
    print("=" * 78)

    target = 1.0 / 3.0
    om = tongue_centre(target, K_LOCK)
    sig = circle_map_orbit(om, K_LOCK)
    q = orbit_period(sig)
    r_frac, k_frac, _ = range_kernel_fractions(sig)

    genuinely_locked = q == 3
    in_kernel = r_frac < THRESH

    print(f"  rho = 1/3: Omega*             : {om:.6f}")
    print(f"  detected period               : {q}  " f"(locked={genuinely_locked})")
    print(f"  range(R_inf) fraction         : {100.0 * r_frac:7.4f} %")
    print(f"  ker(R_inf)   fraction         : {100.0 * k_frac:7.4f} %")
    print("  => LOCKED in the dynamics, yet in ker(R_inf): the lock/")
    print("     no-lock split does NOT equal the range/ker split.")
    ok = genuinely_locked and in_kernel
    msg = (
        (
            "locked-but-incommensurate orbit is in ker: R_inf lattice "
            "coarser than lockings"
        )
        if ok
        else "1/3 did not behave"
    )
    print(f"  VERDICT: {'PASS' if ok else 'FAIL'} -- {msg}")
    print()
    return ok


# --------------------------------------------------------------------------- #
# TEST 4 -- canonical R_infinity controls + P50 reconciliation + scope
# --------------------------------------------------------------------------- #
def test_canonical_crosscheck_and_scope() -> bool:
    print("=" * 78)
    print("TEST 4 -- canonical R_infinity controls + P50 reconciliation:")
    print("          the same kernel holds the prime residue AND the")
    print("          golden orbit; ker membership LOCATES, never closes")
    print("=" * 78)

    t = np.arange(N_SAMPLES, dtype=float)
    # Positive control: a pure resonant tone sin(2*pi*T / L) -> range.
    omega_res = 2.0 * math.pi / LCM_L
    ctrl_res = np.sin(omega_res * t)
    r_res, _, src = range_kernel_fractions(ctrl_res)
    # Negative control: sin(gamma * T), gamma transcendental -> ker.
    ctrl_non = np.sin(_GAMMA_EM * t)
    r_non, k_non, _ = range_kernel_fractions(ctrl_non)

    res_ok = r_res > (1.0 - THRESH)
    non_ok = k_non > (1.0 - THRESH)

    print(
        f"  control sin(2*pi*T/{LCM_L}) range : "
        f"{100.0 * r_res:7.4f} %  (expect ~100, ok={res_ok})"
    )
    print(
        f"  control sin(gamma*T)   ker    : "
        f"{100.0 * k_non:7.4f} %  (expect ~100, ok={non_ok})"
    )
    print(f"  projector source              : {src}")

    # P50 reconciliation: the canonical prime-ladder S_TNFR in ker.
    p50_ok = True
    if _HAVE_RINF:
        cert = compute_residue_split_certificate(
            n_primes=200, max_power=8, n_periods=64
        )
        p50_ok = cert.verdict == "RESIDUE_IN_KER_ONLY"
        print(
            f"  P50 prime-ladder S_TNFR       : {cert.verdict} "
            f"(ker={100.0 * cert.ratio_in_kernel:.2f}%)"
        )
        print("  => SAME kernel as the golden orbit (Test 1): log p")
        print("     (Baker) and 1/phi are two incommensurate carriers of")
        print("     the ONE residue subspace ker(R_inf).")
    else:
        print("  P50 certificate              : skipped (engine absent)")

    ok = res_ok and non_ok and p50_ok
    msg = (
        (
            "canonical R_inf confirmed; residue LOCATED in ker, NOT "
            "closed (G4 = RH OPEN)"
        )
        if ok
        else "canonical control failed"
    )
    print(f"  VERDICT: {'PASS' if ok else 'FAIL'} -- {msg}")
    print()
    return ok


def main() -> int:
    print(__doc__)
    r1 = test_golden_orbit_in_kernel()
    r2 = test_commensurate_lockings_in_range()
    r3 = test_lattice_coarser_than_lockings()
    r4 = test_canonical_crosscheck_and_scope()

    print("=" * 78)
    print("SUMMARY")
    print("=" * 78)
    print(
        f"  TEST 1 golden orbit in ker(R_inf)        : " f"{'PASS' if r1 else 'FAIL'}"
    )
    print(
        f"  TEST 2 commensurate lockings in range    : " f"{'PASS' if r2 else 'FAIL'}"
    )
    print(
        f"  TEST 3 HONEST LIMIT: lattice coarser     : " f"{'PASS' if r3 else 'FAIL'}"
    )
    print(
        f"  TEST 4 canonical R_inf + P50 + scope     : " f"{'PASS' if r4 else 'FAIL'}"
    )
    print()
    all_ok = r1 and r2 and r3 and r4
    print("  STRUCTURAL CHECKS: " f"{'ALL PASS' if all_ok else 'SOME FAILED'}")
    print()
    print("  THESIS VERDICT: OPEN, by design (it CONNECTS, it")
    print("  does not close). Camino 15 made the rationals + phi")
    print("  emerge from the TIME EVOLUTION of the nodal phase and")
    print("  noted, as a SOFT analogy, that phi (the last to lock)")
    print("  plays the wall-residue role. This harness makes that")
    print("  precise through the ONE canonical proven object, the")
    print("  N15 R_infinity orthogonal projector: the golden orbit")
    print("  is in ker(R_inf) (Test 1, the dynamical twin of P50's")
    print("  prime-ladder S_TNFR in ker), and REMESH-commensurate")
    print("  lockings are in range (Test 2). But the map is PARTIAL")
    print("  (Test 3): a locked rho = 1/3 with period 3 does NOT")
    print("  divide L = 8, so it sits in ker too -- R_inf's lattice")
    print("  is coarser than the Farey set of lockings. The kernel")
    print("  is large and holds BOTH the arithmetic residue carrier")
    print("  (log p, Baker) and the golden orbit; ker membership")
    print("  LOCATES the residue, it is NOT a route to RH. G4 = RH")
    print("  stays OPEN; R and pi remain substrate.")
    return 0 if all_ok else 1


if __name__ == "__main__":
    raise SystemExit(main())