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Resonant Fractal Nature Theory — a mathematical framework for coherent patterns on graph-coupled networks.

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© 2026 TNFR project — MIT licensed.DOI 10.5281/zenodo.17602860
docs
grammar
PHYSICS_VERIFICATION.md
API_CONTRACTS.mdCANONICAL_OZ_SEQUENCES.mdEMPIRICAL_CONFRONTATION_EEG.mdREADME.mdSTRUCTURAL_FIELDS_TETRAD.mdSTRUCTURAL_INTERFACE_THEORY.md
theory
APPLIED_STRUCTURAL_ANALYSIS.mdCATALOG_TYPE_HYGIENE_PROGRAMME.mdDISSIPATIVE_AND_OPEN_SYSTEMS.mdEMERGENT_ONTOLOGY.mdEXTENDED_FIELDS_AND_DERIVED_QUANTITIES.mdFUNDAMENTAL_THEORY.mdGAUGE_SYMMETRY_AND_UNIFICATION.mdGLOSSARY.mdMATHEMATICAL_DYNAMICS_BASIS.mdMINIMAL_STRUCTURAL_DEGREES.mdNUCLEUS_A_PRIME_LADDER_ATLAS.mdNUCLEUS_B_EQUIVARIANCE_OBSTRUCTIONS.mdPHYSICAL_REGIME_CORRESPONDENCES.mdREADME.mdREMESH_INFINITY_DERIVATION.mdSTRUCTURAL_CONSERVATION_THEOREM.mdSTRUCTURAL_OPERATORS.mdSTRUCTURAL_STABILITY_AND_DYNAMICS.mdTNFR_BSD_RESEARCH_NOTES.mdTNFR_HODGE_RESEARCH_NOTES.mdTNFR_NAVIER_STOKES_RESEARCH_NOTES.mdTNFR_NUMBER_THEORY.mdTNFR_P_VS_NP_RESEARCH_NOTES.mdTNFR_RIEMANN_RESEARCH_NOTES.mdTNFR_VARIATIONAL_PRINCIPLE.mdTNFR_YANG_MILLS_RESEARCH_NOTES.mdTNFR.pdfUNIFIED_GRAMMAR_RULES.md
factorization-lab
analysis
analyze_patterns.pycertificate_manifest.py
benchmarks
benchmark_analysis.pybenchmark_expansion_suite.pyfull_spectrum_factorization.pypaley_gap_extended.pypaley_gap_smoke.pytest_benchmark_suite.py
demos
experiment_contexts
exp_0b1663cd19b7.jsonexp_0bf0054b7474.jsonexp_75a4c8ca616a.jsonexp_848ee0fd1857.jsonexp_f6fe00562193.jsonexp_fdf3da424e1e.json
failure_telemetry_batch.pyfeedback_integration_demo.pyintegration_demo_snapshots.dbseed_management_integration_demo.pysnapshot_integration_demo.pytrajectory_143.jsontrajectory_77.jsontrajectory_89.jsontrajectory_91.jsontrajectory_97.json
docs
FACTORING_PLAYBOOK.mdFALSE_POSITIVE_TEST_SUITE.mdOPERATOR_CERTIFICATES.mdROADMAP.mdSPECTRAL_ROUTE.md
experiment_contexts
exp_cebe1d9e7d8e.json
notebooks
spectral_history.ipynb
scripts
run_false_positive_tests.py
tests
run_false_positive_test_suite.pytest_cli.pytest_false_positive_methodology.pytest_false_positive_verifier.pytest_feedback_integration.pytest_partitioning.pytest_seed_management.pytest_self_opt_support.pytest_snapshot_system.pytest_spectral_paley.pytest_verification_robustness.py
tnfr_factorization
__init__.pyapi.pycli.pyfailure_telemetry.pyfeedback_adapter.pyfeedback_integration.pypartitioning.pyself_opt_support.pyspectral_paley.py
demo_snapshots.dbLICENSE_SNAPSHOT.mdPACKAGE_SUMMARY.mdREADME.mdseed_management.pysnapshot_system.pytest_certificate_hashing.pytest_installation.pyverification_trajectory_77.json
benchmarks
analyze_tetrad_universality.pyb0star_alpha_canonical_product_graphs.pybenchmark_optimization_tracks.pybenchmark_utils.pyboundary_vibration.pybridge_primes_riemann.pychiral_involution.pycli_utils.pycoherence_projector_sense_index.pycommutant_bridge.pycomposition_arithmetic.pyconfinement_zones_test.pyconservation_law_validation.pydirected_paley_bridge.pyemergent_arithmetic_pulse.pyemergent_atom_dynamics.pyemergent_atomic_shells.pyemergent_base_dimension.pyemergent_dimension_dynamics.pyemergent_fractal_pulse.pyemergent_fractal_simplex_dimension.pyemergent_integers_symmetry.pyemergent_musical_nfr.pyemergent_nfr_geometry.pyemergent_nfr_where.pyemergent_rationals.pyemergent_rhythm.pyemergent_screening.pyemergent_shell_cardinals.pyemergent_shell_ordering.pyemergent_simplex_dimension.pyemergent_substrate_symmetry.pyequivariance_wall.pyexternal_phase_gate_validation.pyfield_methods_battery.pygolden_residue_remesh_bridge.pyintegrated_force_regime_study.pyinverse_spectrum_to_symmetry.pyk_phi_safety_demo.pykuramoto_farey_bridge.pymissing_piece_bridge.pymultichannel_interface_benchmark.pynavier_stokes_recipe_bridge.pynodal_propagator_residue_bridge.pyns_moment_hierarchy_cascade.pyoperational_irreducibility.pypaley_bridge.pyphase_curvature_investigation.pyphase_wall.pyphi_s_confinement_investigation.pyprimes_as_consequence.pypulse_phase_coherence_budget.pyREADME.mdremesh_infinity_riemann_baseline.pyremesh_infinity_riemann_composed.pyremesh_infinity_riemann_modified_graph.pyremesh_infinity_riemann_operator.pyremesh_infinity_riemann_spectral_basis.pyremesh_infinity_riemann_spectral_robustness.pyremesh_infinity_riemann_spectral.pyresidue_phase_vs_riemann.pystructural_interface_benchmark.pytemporal_interface_benchmark.pytetrad_results_aggregate.pyu2_destabilization_irreversibility.pyuniversality_clusters.pyxi_c_fast_experiment.py
primality-test
benchmarks
comprehensive_benchmark.py
docs
ADVANCED_INTEGRATION.mdmathematical_foundation.mdperformance_analysis.md
examples
advanced_examples.pybasic_usage.py
tnfr_primality
__init__.py__main__.pyadvanced_cli.pyadvanced_core.pycli.pyconstants.pycore.pyoptimized.py
MANIFEST.inPACKAGE_SUMMARY.mdREADME.mdRELEASE_NOTES_v1.0.mdsetup.pytest_installation.py
tests
core_physics
__init__.pytest_conservation_laws.pytest_delta_nfr_computation_paths.pytest_delta_nfr.pytest_dispersion_coherence_sign_invariance.pytest_emergent_constants_guard.pytest_lyapunov_operators.pytest_nodal_equation.pytest_structural_triad.py
data
replay_manifests
sample_run
_manifest_summary.json_manifest.json_partition_files.txt.gz
self_opt_validation
seed_alpha
paley.json
seed_beta
integration.json
seed_gamma
unknown.json
self_optimization
test_run
partitioned
test_run
test_run_p0.jsontest_run_p1.json
_manifest_summary.json_manifest.json
engines
test_pattern_discovery_manifest.pytest_self_optimization_engine.py
mathematics
__init__.pytest_autodiff.pytest_backends.pytest_dissipative_dynamics.pytest_epi.pytest_factory_patterns.pytest_metrics.pytest_navier_stokes_refounded.pytest_number_theory_canonical.pytest_operators.pytest_residue_networks.pytest_riemann_nodal_pulse.pytest_riemann_pulse_coherence.pytest_spaces.pytest_transforms.pytest_validator.py
operators
test_canonical_operators_modern.pytest_grammar_canon.pytest_grammar_canonical_consistency.pytest_grammar_dynamics.pytest_operator_contracts.pytest_operator_strategies.py
parallel
test_fractal_partition_manifest.py
physics
test_conservation_gauge_unification.pytest_dissipative_conservation.pytest_emergent_chemistry.pytest_field_cache_invalidation.pytest_gauge.pytest_phase_transition.pytest_signatures.pytest_spectral_conservation.pytest_structural_diffusion.pytest_structural_integrity.pytest_symplectic_substrate.pytest_tetrad_bounds.pytest_variational.pytest_yang_mills_closure.pytest_yang_mills_derivability.pytest_yang_mills_scaling.pytest_yang_mills_structural_gap.pytest_yang_mills_u6_sweep.py
scripts
test_run_self_opt_validation.pytest_run_self_optimization.py
sdk
__init__.pytest_simple_advanced.py
__init__.pyconftest.pyREADME.mdtest_breast_cancer_phase_gate_demo.pytest_classical_mechanics.pytest_distributed_fft.pytest_external_phase_gate_validation.pytest_factorization_entrypoint.pytest_multichannel_interface.pytest_nodal_optimizer.pytest_phase_gate_api.pytest_replay_register_manifest.pytest_signal_confrontation.pytest_structural_interface_api.pytest_structural_interface_baselines.pytest_structural_interface_benchmark.pytest_temporal_interface.pytest_vectorized_coherence_length_regression.pytest_wine_quality_phase_gate_demo.pyutils.py
examples
01_foundations
01_hello_world.py02_musical_resonance.py03_network_formation.py04_operator_sequences.py05_coherence_evolution.py06_network_topologies.py07_phase_transitions.py08_emergent_phenomena.py09_visualization_suite.py10_simplified_sdk_showcase.py
02_physics_regimes
11_classical_limit_comparison.py115_operator_contract_audit.py12_classical_mechanics_demo.py13_quantum_mechanics_demo.py14_uncertainty_and_interference.py15_train_crossing_demo.py17_conservation_law_demo.py26_gauge_structure_demo.py27_variational_principle_demo.py28_dissipative_systems_demo.py29_lyapunov_stability_demo.py30_self_optimization_demo.py31_mathematical_constants_basis.py33_complex_field_unification.py34_conservation_protocol_suite.py35_tetrad_irreducibility.py36_grammar_violation_detector.py37_operator_tetrad_synergy.py38_grammar_energy_landscape.py39_nodal_equation_decomposition.py
03_riemann_zeta
157_nodal_pulse_phase_attack.py41_von_mangoldt_zeta_demo.py42_riemann_zeros_as_resonances.py43_prime_ladder_hamiltonian_demo.py44_weil_explicit_formula_demo.py45_li_keiper_demo.py46_weil_tnfr_positivity_demo.py47_alpha_sweep_demo.py48_admissible_family_sweep_demo.py49_nodeaware_gauge_sweep_demo.py50_uniform_coercivity_demo.py51_adaptive_coercivity_demo.py52_paley_gap_coercivity_demo.py53_lyapunov_spectral_positivity_demo.py54_hilbert_polya_demo.py55_structural_zero_density_demo.py56_spectral_emergence_demo.py57_admissible_rescaling_demo.py58_oscillatory_correction_demo.py
04_riemann_L_twisted
59_dirichlet_l_function_demo.py60_dirichlet_l_continuation_demo.py61_dirichlet_l_hamiltonian_demo.py62_dirichlet_weil_explicit_formula_demo.py63_dirichlet_li_keiper_demo.py64_twisted_weil_positivity_demo.py65_twisted_alpha_sweep_demo.py66_twisted_admissible_family_sweep_demo.py67_twisted_nodeaware_gauge_sweep_demo.py68_twisted_hermite_family_demo.py69_twisted_coercivity_uniform_demo.py70_twisted_paley_gap_coercivity_demo.py71_twisted_lyapunov_spectral_demo.py72_twisted_hilbert_polya_demo.py73_twisted_structural_zero_density_demo.py74_twisted_spectral_emergence_demo.py75_twisted_admissible_rescaling_demo.py76_twisted_oscillatory_correction_demo.py
05_type_hygiene
77_remesh_infinity_residue_split_demo.py78_nuf_type_signature_demo.py79_epi_type_signature_demo.py80_phi_type_signature_demo.py81_dnfr_type_signature_demo.py82_remesh_window_type_signature_demo.py83_delta_phi_max_type_signature_demo.py84_coupling_weights_type_signature_demo.py85_tetrad_closure_signature_demo.py86_currents_closure_signature_demo.py87_aggregates_closure_signature_demo.py88_urules_consistency_signature_demo.py89_operator_catalog_discipline_signature_demo.py
06_navier_stokes
158_navier_stokes_two_face_refounded.py
07_number_theory
100_prime_families_orbits.py101_numbers_as_coupled_network.py102_nodal_flow_primes_equilibria.py116_nuf_emergent_prime_visibility.py146_primality_grammatical_inertness.py147_numbers_as_free_monoid_words.py148_capacity_arm_carries_von_mangoldt.py149_p14_is_the_capacity_arm_operator.py153_structural_frequency_rank_cyclotomy.py40_arithmetic_number_theory.py94_generative_number_construction.py95_primes_from_spectral_waves.py96_spectral_vibration_of_coherence.py97_goldbach_additive_multiplicative.pyemergent_chemistry_particles_demo.py
08_emergent_geometry
103_emergent_substrate_meets_riemann.py106_per_node_polarization_geometry.py107_orthogonal_structure_emergent_geometry.py108_emergent_field_generating_structure.py112_structure_predicts_coherence_flow.py113_overdamped_projection_bridge.py114_substrate_conserved_quantities.py117_emergent_geometry_residue_graph.py118_emergent_vs_classical_operator.py119_phase_sector_directed_residue.py120_symmetry_wall_substrate_vs_spectrum.py121_canonical_symmetry_break_negative.py122_factorization_phase_sector.py123_symmetry_sector_decomposition.py124_emergent_metric_fractal_consistency.py125_node_is_the_emergent_substrate.py126_two_layers_base_fiber.py127_base_is_emergent_not_imposed.py128_base_substrate_coemergence.py129_spectral_gap_base_fiber_clock.py130_operators_break_substrate_charges.py131_coemergent_loop_convergence.py132_geometric_phase_holonomy.py133_psi_topological_defects.py134_spectral_dimension_heat_kernel.py135_arrow_of_time_h_theorem.py136_heat_kernel_coefficients.py137_synchronization_transition.py138_structure_frequency_synchronization.py139_grammar_formal_language.py140_grammar_automaton.py141_grammar_rule_decomposition.py142_grammar_operator_quotient.py143_glyphic_function_sublanguage.py144_branching_combinator.py145_syntactic_monoid_starfree.py150_emergent_grammatical_pattern_parry.py151_grammar_in_emergent_geometry.py152_operator_contract_tetrahedron.py154_conductor_annotated_qr_spectrum.py155_ontological_position_of_numbers.py156_emergence_directness_law.py98_emergent_symplectic_substrate.py99_structural_diffusion.pyunified_fields_showcase.py
09_millennium
109_p_vs_np_coherence_synthesis.py110_bsd_rank_structural_pressure.py111_hodge_discrete_and_honest_gap.py
10_applications
159_empirical_confrontation_pipeline.py90_phase_gate_monitor_demo.py91_breast_cancer_phase_gate_demo.py92_wine_quality_phase_gate_demo.py93_structural_interface_demo.pypytorch_cuda_demo.py
README.md
scripts
replay
__init__.pyregister_manifest.py
__init__.pyREADME.mdrebuild_failure_manifest.pyrun_reproducible_benchmarks.pyrun_self_opt_validation.pyrun_self_optimization.pytnfr_is_prime.pyvalidate_conservation_law.pyverify_internal_references.py
src
core
__init__.pyevaluation.py
tnfr
backends
__init__.pyjax_backend.pynumpy_backend.pyoptimized_numpy.pyREADME.mdtorch_backend.py
cli
__init__.py__init__.pyiarguments.pyarguments.pyiexecution.pyexecution.pyiinteractive_validator.pyREADME.mdutils.pyutils.pyi
compat
__init__.pydataclass.pyjsonschema_stub.pymatplotlib_stub.pynumpy_stub.pyREADME.md
config
__init__.py__init__.pyiconstants.pyconstants.pyidefaults_core.pydefaults_init.pydefaults_metric.pydefaults.pyfeature_flags.pyfeature_flags.pyiglyph_constants.pyoperator_names.pyoperator_names.pyiphysics_derivation.pyprecision_modes.pypresets.pypresets.pyiREADME.mdsecurity.pythresholds.pytnfr_config.py
constants
__init__.py__init__.pyialiases.pyaliases.pyicanonical.pymetric.pymetric.pyioperational.py
core
__init__.pycontainer.pydefault_implementations.pyexceptions.pyinterfaces.pyREADME.md
dynamics
__init__.py__init__.pyiadaptation.pyadaptation.pyiadaptive_sequences.pyadaptive_sequences.pyiadelic.pyadvanced_cache_optimizer.pyadvanced_fft_arithmetic.pyaliases.pyaliases.pyibifurcation.pycache_aware_fft_engine.pycanonical.pycanonical.pyicomputational_hub.pycoordination.pycoordination.pyidistributed_fft.pydnfr.pydnfr.pyidynamic_limits.pyemergent_centralization.pyemergent_integration_engine.pyfeedback.pyfeedback.pyifft_backend.pyfft_cache_coordinator.pyfft_dispatchers.pyfft_engine.pyfft_workers.pyfused_dnfr.pyhomeostasis.pyhomeostasis.pyiintegrators.pyintegrators.pyilearning.pylearning.pyimetabolism.pymulti_modal_cache.pynbody_tnfr.pynbody.pynodal_optimizer.pyoptimization_orchestrator.pypropagation.pyREADME.mdruntime.pyruntime.pyisampling.pysampling.pyiselectors.pyselectors.pyiself_optimizing_engine.pyspectral_structural_fusion.pystructural_cache.pystructural_clip.pysymplectic.pyunified_backend.pyunified_mathematical_cache_orchestrator.py
engines
computation
__init__.pyfft_engine.pyunified_fft_engine.pyunified_gpu_system.py
constants
__init__.pycanonical.pyoperational.py
integration
__init__.pyemergent_integration.py
pattern_discovery
__init__.pymathematical_patterns.pymulti_modal_cache.py
self_optimization
__init__.pyengine.py
__init__.pyREADME.md
errors
__init__.pycontextual.py
factorization
__init__.py
flatten
README.md
gamma
README.md
glyph_history
README.md
glyph_runtime
README.md
immutable
README.md
initialization
README.md
io
README.md
math
__init__.pyfields_symbolic.pygrammar_validators.pyoptimizer.pyREADME.mdsymbolic.py
mathematics
__init__.pybackend.pybackend.pyidynamics.pydynamics.pyiepi.pyepi.pyigenerators.pygenerators.pyiliouville.pymetrics.pymetrics.pyinumber_theory.pyoperators_factory.pyoperators_factory.pyioperators.pyoperators.pyioptimized_primality.pyprojection.pyprojection.pyiREADME.mdruntime.pyruntime.pyispaces.pyspaces.pyispectral.pytransforms.pytransforms.pyiunified_cache.pyunified_numerical.pyzeta.py
metrics
__init__.py__init__.pyibuffer_cache.pybuffer_cache.pyicache_utils.pycoherence.pycoherence.pyicommon.pycommon.pyicore.pycore.pyidiagnosis.pydiagnosis.pyiemergence.pyexport.pyexport.pyiglyph_timing.pyglyph_timing.pyilearning_metrics.pylearning_metrics.pyilocal_coherence.pyphase_coherence.pyphase_compatibility.pyREADME.mdreporting.pyreporting.pyisense_index.pysense_index.pyitelemetry.pytetrad.pytrig_cache.pytrig_cache.pyitrig.pytrig.pyi
multiscale
__init__.pyhierarchical.pyREADME.md
navier_stokes
__init__.pyconservative_face.pyoperator.py
node
README.md
observers
README.md
operators
network_analysis
__init__.pysource_detection.py
postconditions
__init__.pymutation.py
preconditions
__init__.pycoherence.pydissonance.pyemission.pymutation.pyreception.pyresonance.py
strategies
__init__.pydefaults.pygpu_strategies.pystrategy.py
__init__.py__init__.pyialgebra.pycanonical_patterns.pycascade.pycoherence.pycontraction.pycoupling.pycycle_detection.pydefinitions_base.pydefinitions.pydefinitions.pyidissonance.pyemission.pyexpansion.pygrammar_application.pygrammar_canon.pygrammar_context.pygrammar_core.pygrammar_dynamics.pygrammar_error_factory.pygrammar_memoization.pygrammar_patterns.pygrammar_telemetry.pygrammar_types.pygrammar_u6.pygrammar_validate.pygrammar.pygrammar.pyihamiltonian.pyhealth_analyzer.pyintrospection.pyjitter.pyjitter.pyilifecycle.pymetabolism.pymetrics_basic.pymetrics_core.pymetrics_network.pymetrics_structural.pymetrics_u6.pymetrics.pymutation.pynodal_equation.pyoperator_contracts.pypattern_detection.pypatterns.pyREADME.mdreception.pyrecursivity.pyregistry.pyregistry.pyiremesh.pyremesh.pyiresonance.pyself_organization.pysilence.pystructural_units.pytransition.py
parallel
__init__.pyauto_scaler.pydistributed.pyengine.pymonitoring.pypartitioner.pyREADME.md
performance
guardrails.py
physics
__init__.py_helpers.pycalibration.pycanonical.pycell.pyclassical_mechanics.pyconservation_gauge_unification.pyconservation.pydissipative_conservation.pyemergent_chemistry.pyemergent_particles.pyextended.pyfields.pygauge.pyintegrity.pyinteractions.pylife.pylyapunov.pypatterns.pyphase_transition.pyquantum_mechanics.pyREADME.mdsignatures.pyspectral_conservation.pyspectral_metrics.pystructural_diffusion.pysymplectic_substrate.pytelemetry.pyunified.pyvariational.pyvectorized_ops.py
primality
__init__.py
recipes
__init__.pycookbook.pyREADME.md
riemann
__init__.pyadmissible_family_sweep.pyadmissible_rescaling.pyaggregates_closure_signature.pyalpha_sweep.pyanalytic_continuation_dirichlet.pyanalytic_continuation.pycoercivity_uniform.pycoupling_weights_type_signature.pycurrents_closure_signature.pydelta_phi_max_type_signature.pydirichlet_l.pydnfr_type_signature.pyepi_type_signature.pyhilbert_polya.pyli_keiper.pylyapunov_spectral_positivity.pynodal_pulse.pynodeaware_gauge_sweep.pynuf_type_signature.pyoperator_catalog_discipline_signature.pyoperator.pyoscillatory_correction.pypaley_gap_coercivity.pyphi_type_signature.pyprime_ladder_hamiltonian.pypulse_coherence.pyremesh_infinity_residue_split.pyremesh_window_type_signature.pyspectral_emergence.pystructural_zero_density.pytelemetry.pytetrad_closure_signature.pytwisted_admissible_family_sweep.pytwisted_admissible_rescaling.pytwisted_alpha_sweep.pytwisted_coercivity_uniform.pytwisted_hermite_family.pytwisted_hilbert_polya.pytwisted_li_keiper.pytwisted_lyapunov_spectral_positivity.pytwisted_nodeaware_gauge_sweep.pytwisted_oscillatory_correction.pytwisted_paley_gap_coercivity.pytwisted_prime_ladder_hamiltonian.pytwisted_spectral_emergence.pytwisted_structural_zero_density.pytwisted_weil_explicit_formula.pytwisted_weil_positivity.pyurules_consistency_signature.pyvon_mangoldt.pyweil_explicit_formula.pyweil_positivity.py
schemas
__init__.pygrammar.jsonREADME.md
sdk
__init__.py__init__.pyiadaptive_system.pyadaptive_system.pyibuilders.pybuilders.pyifluent.pyfluent.pyiREADME.mdself_opt.pysimple.pytemplates.pytemplates.pyiutils.py
security
__init__.pycrypto.pydatabase.pyREADME.mdsubprocess.pyvalidation.py
sequencing
__init__.pypatterns.pyREADME.md
services
__init__.pyorchestrator.pyREADME.md
sparse
__init__.pyREADME.mdrepresentations.py
structural
README.md
telemetry
__init__.pycache_metrics.pycache_metrics.pyiconstants.pynu_f.pynu_f.pyiREADME.mdunified_telemetry_system.pyverbosity.pyverbosity.pyi
tools
__init__.pydomain_templates.pyREADME.mdsequence_generator.pytnfr_is_prime_cli_optimized.pytnfr_is_prime_cli.py
topology
__init__.pyasymmetry.pyREADME.md
utils
cache_layers.pycache.pycache.pyicallbacks.pycallbacks.pyichunks.pychunks.pyidata.pydata.pyifast_diameter.pygraph.pygraph.pyiinit.pyinit.pyiio.pyio.pyinumeric.pynumeric.pyiREADME.mdtopology.pyunified_cache.py
validation
__init__.py__init__.pyiaggregator.pybase.pycompatibility.pycompatibility.pyiconfig.pygraph.pygraph.pyihealth.pyinput_validation.pyinterface_baselines.pyinvariants.pymultichannel_interface.pyphase_gate.pyREADME.mdrules.pyrules.pyiruntime.pyruntime.pyisequence_validator.pysignal_confrontation.pysoft_filters.pysoft_filters.pyispectral.pyspectral.pyistructural_interface.pytemporal_interface.pyunified_validation_system.pyvalidator.pywindow.pywindow.pyi
visualization
__init__.pycascade_viz.pyhierarchy.pyREADME.mdsequence_plotter.py
yang_mills
__init__.pyclosure.pyderivability.pyscaling.pystructural_gap.pyu6_sweep.py
__init__.py__init__.pyi_compat.py_version.py_version.pyialias.pyalias.pyibackend_config.pycache.pycache.pyiexecution.pyexecution.pyiflatten.pyflatten.pyigamma.pygamma.pyiglyph_history.pyglyph_history.pyiglyph_runtime.pyglyph_runtime.pyiimmutable.pyimmutable.pyiinitialization.pyinitialization.pyiio.pyio.pyilocking.pylocking.pyinode.pynode.pyiobservers.pyobservers.pyiontosim.pyontosim.pyipy.typedrng.pyrng.pyisecure_config.pyselector.pyselector.pyisense.pysense.pyistructural.pystructural.pyitokens.pytokens.pyitrace.pytrace.pyitypes.pytypes.pyiunits.pyunits.pyi
tetrad_evaluator.py
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FILE: examples/02_physics_regimes/31_mathematical_constants_basis.py

31_mathematical_constants_basis.py

Example 31: The π Structural Scale and the Derivative-Tower Tetrad.

Demonstrates the single genuine structural scale of TNFR — π — and how the four structural fields emerge as the four orders of the discrete structural-derivative tower. Nothing here is assumed beyond π and the continuum ℝ; every other quantity emerges from the nodal dynamics ∂EPI/∂t = νf · ΔNFR(t).

Only π is a genuine structural scale: it bounds the WHOLE phase sector, since both phase derivatives are wrapped angles —

text
|∇φ| ≤ π   and   |K_φ| ≤ π .

The four tetrad fields are the four orders of the derivative tower:

text
Φ_s   (0th order, global aggregation)   ΔNFR_j → Σ 1/d²
|∇φ|  (1st order, local derivative)      φ_i   → ∇
K_φ   (2nd order, local Laplacian)       φ_i   → ∇²   (K_φ = L_rw·φ)
ξ_C   (correlation, non-local)           correlation range

The coherence length is set by the spectral gap (Fiedler value λ₂):

text
ξ_C ∝ 1/√λ₂ .

Key results shown:

  1. π bounds the whole phase sector: both |∇φ| ≤ π and |K_φ| ≤ π.
  2. The derivative-tower tetrad (Φ_s, |∇φ|, K_φ, ξ_C) on a network.
  3. ξ_C tracks the spectral gap (ξ_C ∝ 1/√λ₂) across topologies.
  4. Cross-topology confinement: the π phase-wrap bounds and the π-derived Φ_s confinement bounds (drift < π/2, per-node < π/4) hold everywhere.

Physics basis: The nodal equation generates a transport layer whose structural diagnostics require exactly four irreducible channels (the orders of the derivative tower). π is the one genuine structural scale (the phase-wrap bound); φ, γ, e play no role and are intentionally absent. See: theory/MATHEMATICAL_DYNAMICS_BASIS.md See: theory/MINIMAL_STRUCTURAL_DEGREES.md §§ 4-5

Source Code

python
"""Example 31: The π Structural Scale and the Derivative-Tower Tetrad.

Demonstrates the single genuine structural scale of TNFR — π — and how the
four structural fields emerge as the four orders of the discrete
structural-derivative tower. Nothing here is assumed beyond π and the
continuum ℝ; every other quantity emerges from the nodal dynamics
∂EPI/∂t = νf · ΔNFR(t).

Only π is a genuine structural scale: it bounds the WHOLE phase sector,
since both phase derivatives are wrapped angles —

    |∇φ| ≤ π   and   |K_φ| ≤ π .

The four tetrad fields are the four orders of the derivative tower:

    Φ_s   (0th order, global aggregation)   ΔNFR_j → Σ 1/d²
    |∇φ|  (1st order, local derivative)      φ_i   → ∇
    K_φ   (2nd order, local Laplacian)       φ_i   → ∇²   (K_φ = L_rw·φ)
    ξ_C   (correlation, non-local)           correlation range

The coherence length is set by the spectral gap (Fiedler value λ₂):

    ξ_C ∝ 1/√λ₂ .

Key results shown:
  1. π bounds the whole phase sector: both |∇φ| ≤ π and |K_φ| ≤ π.
  2. The derivative-tower tetrad (Φ_s, |∇φ|, K_φ, ξ_C) on a network.
  3. ξ_C tracks the spectral gap (ξ_C ∝ 1/√λ₂) across topologies.
  4. Cross-topology confinement: the π phase-wrap bounds and the π-derived
     Φ_s confinement bounds (drift < π/2, per-node < π/4) hold everywhere.

Physics basis:
  The nodal equation generates a transport layer whose structural diagnostics
  require exactly four irreducible channels (the orders of the derivative
  tower). π is the one genuine structural scale (the phase-wrap bound); φ, γ,
  e play no role and are intentionally absent.
  See: theory/MATHEMATICAL_DYNAMICS_BASIS.md
  See: theory/MINIMAL_STRUCTURAL_DEGREES.md §§ 4-5
"""

from __future__ import annotations

import math
import os
import sys

import networkx as nx
import numpy as np

# Ensure src/ is importable when running from examples/
sys.path.insert(0, os.path.join(os.path.dirname(__file__), "..", "..", "src"))

from tnfr.constants import inject_defaults
from tnfr.constants.canonical import (
    GRAD_PHI_CANONICAL_THRESHOLD,
    K_PHI_CANONICAL_THRESHOLD,
    PHI_S_VON_KOCH_THRESHOLD,
    PI,
    U6_STRUCTURAL_POTENTIAL_LIMIT,
)
from tnfr.physics.fields import (
    compute_phase_curvature,
    compute_phase_gradient,
    compute_structural_potential,
    estimate_coherence_length,
)


def _seed_network(G: "nx.Graph", *, seed: int = 42, correlated: bool = False) -> None:
    """Inject canonical defaults and seed phase / ΔNFR on every node."""
    inject_defaults(G)
    rng = np.random.default_rng(seed)
    prev = 0.0
    for i, n in enumerate(G.nodes()):
        if correlated and i > 0:
            phase = prev + rng.normal(0, 0.3)
        else:
            phase = rng.uniform(0, 2 * math.pi)
        prev = phase
        G.nodes[n]["phase"] = phase
        G.nodes[n]["theta"] = phase
        G.nodes[n]["delta_nfr"] = rng.uniform(-0.5, 0.5)


def _structural_spectral_gap(G: "nx.Graph") -> float:
    """Emergent structural spectral gap λ₂ — the second-smallest eigenvalue of
    the canonical symmetric normalized Laplacian L_sym (same spectrum as the
    random-walk diffusion operator L_rw = I − D⁻¹W that the ΔNFR realises).
    This is the EMERGENT gap that sets ξ_C ∝ 1/√λ₂, not the imposed
    combinatorial λ₂(D − A)."""
    from tnfr.physics.structural_diffusion import symmetric_normalized_laplacian

    _, l_sym = symmetric_normalized_laplacian(G)
    eigvals = np.sort(np.clip(np.linalg.eigvalsh(l_sym), 0.0, None))
    return float(eigvals[1]) if len(eigvals) > 1 else 0.0


# ---------------------------------------------------------------------------
# 1. π bounds the whole phase sector
# ---------------------------------------------------------------------------


def demo_pi_phase_sector() -> None:
    """π bounds BOTH phase derivatives: |∇φ| ≤ π and |K_φ| ≤ π."""
    print("=" * 65)
    print("  1. π — THE GENUINE STRUCTURAL SCALE (whole phase sector)")
    print("=" * 65)

    print("\n  Phase is an angle on S¹, so its derivatives are wrapped angles:")
    print("  wrap_angle(x) = atan2(sin x, cos x) ∈ [-π, π]")
    test_angles = [-4.5, -math.pi, -1.0, 0.0, 1.0, math.pi, 3.5, 7.0]
    print(f"  {'input':>10}  {'wrapped':>12}  {'|wrapped| ≤ π':>16}")
    print("  " + "-" * 42)
    for angle in test_angles:
        wrapped = math.atan2(math.sin(angle), math.cos(angle))
        print(f"  {angle:10.4f}  {wrapped:12.4f}  {abs(wrapped) <= math.pi + 1e-12!s:>16}")

    print("\n  Canonical safety thresholds (90% of the π wrap bound):")
    print(f"    |∇φ| early-warning  GRAD_PHI_CANONICAL_THRESHOLD = {GRAD_PHI_CANONICAL_THRESHOLD:.4f}")
    print(f"    |K_φ| safety        K_PHI_CANONICAL_THRESHOLD    = {K_PHI_CANONICAL_THRESHOLD:.4f}")
    print(f"    Phase-wrap maximum  π                            = {PI:.4f}")

    print("\n  Verification on a Watts-Strogatz network (N=30, k=4, p=0.3):")
    G = nx.watts_strogatz_graph(30, 4, 0.3, seed=42)
    _seed_network(G)
    grad = np.array(list(compute_phase_gradient(G).values()))
    k_phi = np.array(list(compute_phase_curvature(G).values()))
    print(f"    max |∇φ| = {np.max(np.abs(grad)):.4f}   (≤ π? {bool(np.all(np.abs(grad) <= PI + 1e-9))})")
    print(f"    max |K_φ| = {np.max(np.abs(k_phi)):.4f}   (≤ π? {bool(np.all(np.abs(k_phi) <= PI + 1e-9))})")
    print("    Both phase derivatives share the SAME bound — π scales the whole sector.")


# ---------------------------------------------------------------------------
# 2. The derivative-tower tetrad
# ---------------------------------------------------------------------------


def demo_derivative_tower_tetrad() -> None:
    """The four tetrad fields are the four orders of the derivative tower."""
    print("\n" + "=" * 65)
    print("  2. THE DERIVATIVE-TOWER TETRAD (Φ_s, |∇φ|, K_φ, ξ_C)")
    print("=" * 65)

    G = nx.watts_strogatz_graph(40, 4, 0.3, seed=7)
    _seed_network(G, seed=7, correlated=True)

    phi_s = np.array(list(compute_structural_potential(G).values()))
    grad = np.array(list(compute_phase_gradient(G).values()))
    k_phi = np.array(list(compute_phase_curvature(G).values()))
    xi_c = estimate_coherence_length(G)

    print(f"\n  {'field':<8}  {'tower order':<26}  {'magnitude':>12}")
    print("  " + "-" * 52)
    print(f"  {'Φ_s':<8}  {'0th (global aggregation)':<26}  {np.max(np.abs(phi_s)):12.4f}")
    print(f"  {'|∇φ|':<8}  {'1st (local derivative)':<26}  {np.max(np.abs(grad)):12.4f}")
    print(f"  {'K_φ':<8}  {'2nd (discrete Laplacian)':<26}  {np.max(np.abs(k_phi)):12.4f}")
    print(f"  {'ξ_C':<8}  {'correlation (non-local)':<26}  {xi_c:12.4f}")
    print("\n  These four orders are the minimal, complete structural basis:")
    print("  higher graph derivatives decompose into products of lower ones,")
    print("  so no fifth independent channel exists.")


# ---------------------------------------------------------------------------
# 3. ξ_C is set by the spectral gap
# ---------------------------------------------------------------------------


def demo_spectral_coherence_length() -> None:
    """ξ_C tracks the spectral gap: ξ_C ∝ 1/√λ₂."""
    print("\n" + "=" * 65)
    print("  3. COHERENCE LENGTH FROM THE SPECTRAL GAP (ξ_C ∝ 1/√λ₂)")
    print("=" * 65)

    topologies = [
        ("ring (N=40)", nx.cycle_graph(40)),
        ("WS (N=40,k=4)", nx.watts_strogatz_graph(40, 4, 0.2, seed=3)),
        ("WS (N=40,k=8)", nx.watts_strogatz_graph(40, 8, 0.3, seed=3)),
        ("complete (N=20)", nx.complete_graph(20)),
    ]

    print(f"\n  {'topology':<16}  {'λ₂ (L_sym gap)':>14}  {'1/√λ₂':>10}  {'ξ_C (SDK)':>10}")
    print("  " + "-" * 56)
    for name, G in topologies:
        _seed_network(G, seed=11, correlated=True)
        lam2 = _structural_spectral_gap(G)
        inv_sqrt = 1.0 / math.sqrt(lam2) if lam2 > 1e-12 else float("inf")
        xi_c = estimate_coherence_length(G)
        print(f"  {name:<16}  {lam2:14.6f}  {inv_sqrt:10.4f}  {xi_c:10.4f}")

    print("\n  Smaller spectral gap λ₂ → longer coherence length: ξ_C ∝ 1/√λ₂.")
    print("  The scale of ξ_C is the spectral gap, not any assumed constant.")


# ---------------------------------------------------------------------------
# 4. Cross-topology confinement
# ---------------------------------------------------------------------------


def demo_cross_topology_confinement() -> None:
    """The π phase-wrap and π-derived Φ_s bounds hold across topologies."""
    print("\n" + "=" * 65)
    print("  4. CROSS-TOPOLOGY CONFINEMENT (π phase-wrap + π/2, π/4 Φ_s bounds)")
    print("=" * 65)

    print(f"\n  Φ_s drift bound      U6_STRUCTURAL_POTENTIAL_LIMIT = π/2 = {U6_STRUCTURAL_POTENTIAL_LIMIT:.4f}")
    print(f"  Φ_s per-node bound   PHI_S_VON_KOCH_THRESHOLD      = π/4 = {PHI_S_VON_KOCH_THRESHOLD:.4f}")

    topologies = [
        ("ring (N=30)", nx.cycle_graph(30)),
        ("WS (N=30,k=4)", nx.watts_strogatz_graph(30, 4, 0.3, seed=5)),
        ("grid 6x6", nx.grid_2d_graph(6, 6)),
        ("complete (N=15)", nx.complete_graph(15)),
    ]

    print(f"\n  {'topology':<16}  {'max|∇φ|≤π':>10}  {'max|K_φ|≤π':>11}  {'max|Φ_s|':>10}")
    print("  " + "-" * 54)
    for name, G in topologies:
        G = nx.convert_node_labels_to_integers(G)
        _seed_network(G, seed=23)
        grad = np.array(list(compute_phase_gradient(G).values()))
        k_phi = np.array(list(compute_phase_curvature(G).values()))
        phi_s = np.array(list(compute_structural_potential(G).values()))
        grad_ok = bool(np.all(np.abs(grad) <= PI + 1e-9))
        kphi_ok = bool(np.all(np.abs(k_phi) <= PI + 1e-9))
        max_phi_s = float(np.max(np.abs(phi_s))) if phi_s.size else 0.0
        print(f"  {name:<16}  {grad_ok!s:>10}  {kphi_ok!s:>11}  {max_phi_s:10.4f}")

    print("\n  The π phase-wrap bounds hold on every topology — a genuine")
    print("  structural bound, not a calibrated value.")


def main() -> None:
    print()
    print("TNFR — THE π STRUCTURAL SCALE AND THE DERIVATIVE-TOWER TETRAD")
    print("Only π is assumed as a genuine structural scale; ℝ is the assumed")
    print("continuum. Everything else emerges from ∂EPI/∂t = νf · ΔNFR(t).")
    print()

    demo_pi_phase_sector()
    demo_derivative_tower_tetrad()
    demo_spectral_coherence_length()
    demo_cross_topology_confinement()

    print("\n" + "=" * 65)
    print("CONCLUSION: π is the one genuine structural scale (the phase-wrap")
    print("bound of the whole phase sector). The tetrad is the four orders of")
    print("the derivative tower; ξ_C is set by the spectral gap (ξ_C ∝ 1/√λ₂).")
    print("No φ, γ, or e is assumed or used — the structure emerges.")
    print("=" * 65)


if __name__ == "__main__":
    main()