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Resonant Fractal Nature Theory — a mathematical framework for coherent patterns on graph-coupled networks.

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© 2026 TNFR project — MIT licensed.DOI 10.5281/zenodo.17602860
docs
grammar
PHYSICS_VERIFICATION.md
API_CONTRACTS.mdCANONICAL_OZ_SEQUENCES.mdEMPIRICAL_CONFRONTATION_EEG.mdREADME.mdSTRUCTURAL_FIELDS_TETRAD.mdSTRUCTURAL_INTERFACE_THEORY.md
theory
APPLIED_STRUCTURAL_ANALYSIS.mdCATALOG_TYPE_HYGIENE_PROGRAMME.mdDISSIPATIVE_AND_OPEN_SYSTEMS.mdEMERGENT_ONTOLOGY.mdEXTENDED_FIELDS_AND_DERIVED_QUANTITIES.mdFUNDAMENTAL_THEORY.mdGAUGE_SYMMETRY_AND_UNIFICATION.mdGLOSSARY.mdMATHEMATICAL_DYNAMICS_BASIS.mdMINIMAL_STRUCTURAL_DEGREES.mdNUCLEUS_A_PRIME_LADDER_ATLAS.mdNUCLEUS_B_EQUIVARIANCE_OBSTRUCTIONS.mdPHYSICAL_REGIME_CORRESPONDENCES.mdREADME.mdREMESH_INFINITY_DERIVATION.mdSTRUCTURAL_CONSERVATION_THEOREM.mdSTRUCTURAL_OPERATORS.mdSTRUCTURAL_STABILITY_AND_DYNAMICS.mdTNFR_BSD_RESEARCH_NOTES.mdTNFR_HODGE_RESEARCH_NOTES.mdTNFR_NAVIER_STOKES_RESEARCH_NOTES.mdTNFR_NUMBER_THEORY.mdTNFR_P_VS_NP_RESEARCH_NOTES.mdTNFR_RIEMANN_RESEARCH_NOTES.mdTNFR_VARIATIONAL_PRINCIPLE.mdTNFR_YANG_MILLS_RESEARCH_NOTES.mdTNFR.pdfUNIFIED_GRAMMAR_RULES.md
factorization-lab
analysis
analyze_patterns.pycertificate_manifest.py
benchmarks
benchmark_analysis.pybenchmark_expansion_suite.pyfull_spectrum_factorization.pypaley_gap_extended.pypaley_gap_smoke.pytest_benchmark_suite.py
demos
experiment_contexts
exp_0b1663cd19b7.jsonexp_0bf0054b7474.jsonexp_75a4c8ca616a.jsonexp_848ee0fd1857.jsonexp_f6fe00562193.jsonexp_fdf3da424e1e.json
failure_telemetry_batch.pyfeedback_integration_demo.pyintegration_demo_snapshots.dbseed_management_integration_demo.pysnapshot_integration_demo.pytrajectory_143.jsontrajectory_77.jsontrajectory_89.jsontrajectory_91.jsontrajectory_97.json
docs
FACTORING_PLAYBOOK.mdFALSE_POSITIVE_TEST_SUITE.mdOPERATOR_CERTIFICATES.mdROADMAP.mdSPECTRAL_ROUTE.md
experiment_contexts
exp_cebe1d9e7d8e.json
notebooks
spectral_history.ipynb
scripts
run_false_positive_tests.py
tests
run_false_positive_test_suite.pytest_cli.pytest_false_positive_methodology.pytest_false_positive_verifier.pytest_feedback_integration.pytest_partitioning.pytest_seed_management.pytest_self_opt_support.pytest_snapshot_system.pytest_spectral_paley.pytest_verification_robustness.py
tnfr_factorization
__init__.pyapi.pycli.pyfailure_telemetry.pyfeedback_adapter.pyfeedback_integration.pypartitioning.pyself_opt_support.pyspectral_paley.py
demo_snapshots.dbLICENSE_SNAPSHOT.mdPACKAGE_SUMMARY.mdREADME.mdseed_management.pysnapshot_system.pytest_certificate_hashing.pytest_installation.pyverification_trajectory_77.json
benchmarks
analyze_tetrad_universality.pyb0star_alpha_canonical_product_graphs.pybenchmark_optimization_tracks.pybenchmark_utils.pyboundary_vibration.pybridge_primes_riemann.pychiral_involution.pycli_utils.pycoherence_projector_sense_index.pycommutant_bridge.pycomposition_arithmetic.pyconfinement_zones_test.pyconservation_law_validation.pydirected_paley_bridge.pyemergent_arithmetic_pulse.pyemergent_atom_dynamics.pyemergent_atomic_shells.pyemergent_base_dimension.pyemergent_dimension_dynamics.pyemergent_fractal_pulse.pyemergent_fractal_simplex_dimension.pyemergent_integers_symmetry.pyemergent_musical_nfr.pyemergent_nfr_geometry.pyemergent_nfr_where.pyemergent_rationals.pyemergent_rhythm.pyemergent_screening.pyemergent_shell_cardinals.pyemergent_shell_ordering.pyemergent_simplex_dimension.pyemergent_substrate_symmetry.pyequivariance_wall.pyexternal_phase_gate_validation.pyfield_methods_battery.pygolden_residue_remesh_bridge.pyintegrated_force_regime_study.pyinverse_spectrum_to_symmetry.pyk_phi_safety_demo.pykuramoto_farey_bridge.pymissing_piece_bridge.pymultichannel_interface_benchmark.pynavier_stokes_recipe_bridge.pynodal_propagator_residue_bridge.pyns_moment_hierarchy_cascade.pyoperational_irreducibility.pypaley_bridge.pyphase_curvature_investigation.pyphase_wall.pyphi_s_confinement_investigation.pyprimes_as_consequence.pypulse_phase_coherence_budget.pyREADME.mdremesh_infinity_riemann_baseline.pyremesh_infinity_riemann_composed.pyremesh_infinity_riemann_modified_graph.pyremesh_infinity_riemann_operator.pyremesh_infinity_riemann_spectral_basis.pyremesh_infinity_riemann_spectral_robustness.pyremesh_infinity_riemann_spectral.pyresidue_phase_vs_riemann.pystructural_interface_benchmark.pytemporal_interface_benchmark.pytetrad_results_aggregate.pyu2_destabilization_irreversibility.pyuniversality_clusters.pyxi_c_fast_experiment.py
primality-test
benchmarks
comprehensive_benchmark.py
docs
ADVANCED_INTEGRATION.mdmathematical_foundation.mdperformance_analysis.md
examples
advanced_examples.pybasic_usage.py
tnfr_primality
__init__.py__main__.pyadvanced_cli.pyadvanced_core.pycli.pyconstants.pycore.pyoptimized.py
MANIFEST.inPACKAGE_SUMMARY.mdREADME.mdRELEASE_NOTES_v1.0.mdsetup.pytest_installation.py
tests
core_physics
__init__.pytest_conservation_laws.pytest_delta_nfr_computation_paths.pytest_delta_nfr.pytest_dispersion_coherence_sign_invariance.pytest_emergent_constants_guard.pytest_lyapunov_operators.pytest_nodal_equation.pytest_structural_triad.py
data
replay_manifests
sample_run
_manifest_summary.json_manifest.json_partition_files.txt.gz
self_opt_validation
seed_alpha
paley.json
seed_beta
integration.json
seed_gamma
unknown.json
self_optimization
test_run
partitioned
test_run
test_run_p0.jsontest_run_p1.json
_manifest_summary.json_manifest.json
engines
test_pattern_discovery_manifest.pytest_self_optimization_engine.py
mathematics
__init__.pytest_autodiff.pytest_backends.pytest_dissipative_dynamics.pytest_epi.pytest_factory_patterns.pytest_metrics.pytest_navier_stokes_refounded.pytest_number_theory_canonical.pytest_operators.pytest_residue_networks.pytest_riemann_nodal_pulse.pytest_riemann_pulse_coherence.pytest_spaces.pytest_transforms.pytest_validator.py
operators
test_canonical_operators_modern.pytest_grammar_canon.pytest_grammar_canonical_consistency.pytest_grammar_dynamics.pytest_operator_contracts.pytest_operator_strategies.py
parallel
test_fractal_partition_manifest.py
physics
test_conservation_gauge_unification.pytest_dissipative_conservation.pytest_emergent_chemistry.pytest_field_cache_invalidation.pytest_gauge.pytest_phase_transition.pytest_signatures.pytest_spectral_conservation.pytest_structural_diffusion.pytest_structural_integrity.pytest_symplectic_substrate.pytest_tetrad_bounds.pytest_variational.pytest_yang_mills_closure.pytest_yang_mills_derivability.pytest_yang_mills_scaling.pytest_yang_mills_structural_gap.pytest_yang_mills_u6_sweep.py
scripts
test_run_self_opt_validation.pytest_run_self_optimization.py
sdk
__init__.pytest_simple_advanced.py
__init__.pyconftest.pyREADME.mdtest_breast_cancer_phase_gate_demo.pytest_classical_mechanics.pytest_distributed_fft.pytest_external_phase_gate_validation.pytest_factorization_entrypoint.pytest_multichannel_interface.pytest_nodal_optimizer.pytest_phase_gate_api.pytest_replay_register_manifest.pytest_signal_confrontation.pytest_structural_interface_api.pytest_structural_interface_baselines.pytest_structural_interface_benchmark.pytest_temporal_interface.pytest_vectorized_coherence_length_regression.pytest_wine_quality_phase_gate_demo.pyutils.py
examples
01_foundations
01_hello_world.py02_musical_resonance.py03_network_formation.py04_operator_sequences.py05_coherence_evolution.py06_network_topologies.py07_phase_transitions.py08_emergent_phenomena.py09_visualization_suite.py10_simplified_sdk_showcase.py
02_physics_regimes
11_classical_limit_comparison.py115_operator_contract_audit.py12_classical_mechanics_demo.py13_quantum_mechanics_demo.py14_uncertainty_and_interference.py15_train_crossing_demo.py17_conservation_law_demo.py26_gauge_structure_demo.py27_variational_principle_demo.py28_dissipative_systems_demo.py29_lyapunov_stability_demo.py30_self_optimization_demo.py31_mathematical_constants_basis.py33_complex_field_unification.py34_conservation_protocol_suite.py35_tetrad_irreducibility.py36_grammar_violation_detector.py37_operator_tetrad_synergy.py38_grammar_energy_landscape.py39_nodal_equation_decomposition.py
03_riemann_zeta
157_nodal_pulse_phase_attack.py41_von_mangoldt_zeta_demo.py42_riemann_zeros_as_resonances.py43_prime_ladder_hamiltonian_demo.py44_weil_explicit_formula_demo.py45_li_keiper_demo.py46_weil_tnfr_positivity_demo.py47_alpha_sweep_demo.py48_admissible_family_sweep_demo.py49_nodeaware_gauge_sweep_demo.py50_uniform_coercivity_demo.py51_adaptive_coercivity_demo.py52_paley_gap_coercivity_demo.py53_lyapunov_spectral_positivity_demo.py54_hilbert_polya_demo.py55_structural_zero_density_demo.py56_spectral_emergence_demo.py57_admissible_rescaling_demo.py58_oscillatory_correction_demo.py
04_riemann_L_twisted
59_dirichlet_l_function_demo.py60_dirichlet_l_continuation_demo.py61_dirichlet_l_hamiltonian_demo.py62_dirichlet_weil_explicit_formula_demo.py63_dirichlet_li_keiper_demo.py64_twisted_weil_positivity_demo.py65_twisted_alpha_sweep_demo.py66_twisted_admissible_family_sweep_demo.py67_twisted_nodeaware_gauge_sweep_demo.py68_twisted_hermite_family_demo.py69_twisted_coercivity_uniform_demo.py70_twisted_paley_gap_coercivity_demo.py71_twisted_lyapunov_spectral_demo.py72_twisted_hilbert_polya_demo.py73_twisted_structural_zero_density_demo.py74_twisted_spectral_emergence_demo.py75_twisted_admissible_rescaling_demo.py76_twisted_oscillatory_correction_demo.py
05_type_hygiene
77_remesh_infinity_residue_split_demo.py78_nuf_type_signature_demo.py79_epi_type_signature_demo.py80_phi_type_signature_demo.py81_dnfr_type_signature_demo.py82_remesh_window_type_signature_demo.py83_delta_phi_max_type_signature_demo.py84_coupling_weights_type_signature_demo.py85_tetrad_closure_signature_demo.py86_currents_closure_signature_demo.py87_aggregates_closure_signature_demo.py88_urules_consistency_signature_demo.py89_operator_catalog_discipline_signature_demo.py
06_navier_stokes
158_navier_stokes_two_face_refounded.py
07_number_theory
100_prime_families_orbits.py101_numbers_as_coupled_network.py102_nodal_flow_primes_equilibria.py116_nuf_emergent_prime_visibility.py146_primality_grammatical_inertness.py147_numbers_as_free_monoid_words.py148_capacity_arm_carries_von_mangoldt.py149_p14_is_the_capacity_arm_operator.py153_structural_frequency_rank_cyclotomy.py40_arithmetic_number_theory.py94_generative_number_construction.py95_primes_from_spectral_waves.py96_spectral_vibration_of_coherence.py97_goldbach_additive_multiplicative.pyemergent_chemistry_particles_demo.py
08_emergent_geometry
103_emergent_substrate_meets_riemann.py106_per_node_polarization_geometry.py107_orthogonal_structure_emergent_geometry.py108_emergent_field_generating_structure.py112_structure_predicts_coherence_flow.py113_overdamped_projection_bridge.py114_substrate_conserved_quantities.py117_emergent_geometry_residue_graph.py118_emergent_vs_classical_operator.py119_phase_sector_directed_residue.py120_symmetry_wall_substrate_vs_spectrum.py121_canonical_symmetry_break_negative.py122_factorization_phase_sector.py123_symmetry_sector_decomposition.py124_emergent_metric_fractal_consistency.py125_node_is_the_emergent_substrate.py126_two_layers_base_fiber.py127_base_is_emergent_not_imposed.py128_base_substrate_coemergence.py129_spectral_gap_base_fiber_clock.py130_operators_break_substrate_charges.py131_coemergent_loop_convergence.py132_geometric_phase_holonomy.py133_psi_topological_defects.py134_spectral_dimension_heat_kernel.py135_arrow_of_time_h_theorem.py136_heat_kernel_coefficients.py137_synchronization_transition.py138_structure_frequency_synchronization.py139_grammar_formal_language.py140_grammar_automaton.py141_grammar_rule_decomposition.py142_grammar_operator_quotient.py143_glyphic_function_sublanguage.py144_branching_combinator.py145_syntactic_monoid_starfree.py150_emergent_grammatical_pattern_parry.py151_grammar_in_emergent_geometry.py152_operator_contract_tetrahedron.py154_conductor_annotated_qr_spectrum.py155_ontological_position_of_numbers.py156_emergence_directness_law.py98_emergent_symplectic_substrate.py99_structural_diffusion.pyunified_fields_showcase.py
09_millennium
109_p_vs_np_coherence_synthesis.py110_bsd_rank_structural_pressure.py111_hodge_discrete_and_honest_gap.py
10_applications
159_empirical_confrontation_pipeline.py90_phase_gate_monitor_demo.py91_breast_cancer_phase_gate_demo.py92_wine_quality_phase_gate_demo.py93_structural_interface_demo.pypytorch_cuda_demo.py
README.md
scripts
replay
__init__.pyregister_manifest.py
__init__.pyREADME.mdrebuild_failure_manifest.pyrun_reproducible_benchmarks.pyrun_self_opt_validation.pyrun_self_optimization.pytnfr_is_prime.pyvalidate_conservation_law.pyverify_internal_references.py
src
core
__init__.pyevaluation.py
tnfr
backends
__init__.pyjax_backend.pynumpy_backend.pyoptimized_numpy.pyREADME.mdtorch_backend.py
cli
__init__.py__init__.pyiarguments.pyarguments.pyiexecution.pyexecution.pyiinteractive_validator.pyREADME.mdutils.pyutils.pyi
compat
__init__.pydataclass.pyjsonschema_stub.pymatplotlib_stub.pynumpy_stub.pyREADME.md
config
__init__.py__init__.pyiconstants.pyconstants.pyidefaults_core.pydefaults_init.pydefaults_metric.pydefaults.pyfeature_flags.pyfeature_flags.pyiglyph_constants.pyoperator_names.pyoperator_names.pyiphysics_derivation.pyprecision_modes.pypresets.pypresets.pyiREADME.mdsecurity.pythresholds.pytnfr_config.py
constants
__init__.py__init__.pyialiases.pyaliases.pyicanonical.pymetric.pymetric.pyioperational.py
core
__init__.pycontainer.pydefault_implementations.pyexceptions.pyinterfaces.pyREADME.md
dynamics
__init__.py__init__.pyiadaptation.pyadaptation.pyiadaptive_sequences.pyadaptive_sequences.pyiadelic.pyadvanced_cache_optimizer.pyadvanced_fft_arithmetic.pyaliases.pyaliases.pyibifurcation.pycache_aware_fft_engine.pycanonical.pycanonical.pyicomputational_hub.pycoordination.pycoordination.pyidistributed_fft.pydnfr.pydnfr.pyidynamic_limits.pyemergent_centralization.pyemergent_integration_engine.pyfeedback.pyfeedback.pyifft_backend.pyfft_cache_coordinator.pyfft_dispatchers.pyfft_engine.pyfft_workers.pyfused_dnfr.pyhomeostasis.pyhomeostasis.pyiintegrators.pyintegrators.pyilearning.pylearning.pyimetabolism.pymulti_modal_cache.pynbody_tnfr.pynbody.pynodal_optimizer.pyoptimization_orchestrator.pypropagation.pyREADME.mdruntime.pyruntime.pyisampling.pysampling.pyiselectors.pyselectors.pyiself_optimizing_engine.pyspectral_structural_fusion.pystructural_cache.pystructural_clip.pysymplectic.pyunified_backend.pyunified_mathematical_cache_orchestrator.py
engines
computation
__init__.pyfft_engine.pyunified_fft_engine.pyunified_gpu_system.py
constants
__init__.pycanonical.pyoperational.py
integration
__init__.pyemergent_integration.py
pattern_discovery
__init__.pymathematical_patterns.pymulti_modal_cache.py
self_optimization
__init__.pyengine.py
__init__.pyREADME.md
errors
__init__.pycontextual.py
factorization
__init__.py
flatten
README.md
gamma
README.md
glyph_history
README.md
glyph_runtime
README.md
immutable
README.md
initialization
README.md
io
README.md
math
__init__.pyfields_symbolic.pygrammar_validators.pyoptimizer.pyREADME.mdsymbolic.py
mathematics
__init__.pybackend.pybackend.pyidynamics.pydynamics.pyiepi.pyepi.pyigenerators.pygenerators.pyiliouville.pymetrics.pymetrics.pyinumber_theory.pyoperators_factory.pyoperators_factory.pyioperators.pyoperators.pyioptimized_primality.pyprojection.pyprojection.pyiREADME.mdruntime.pyruntime.pyispaces.pyspaces.pyispectral.pytransforms.pytransforms.pyiunified_cache.pyunified_numerical.pyzeta.py
metrics
__init__.py__init__.pyibuffer_cache.pybuffer_cache.pyicache_utils.pycoherence.pycoherence.pyicommon.pycommon.pyicore.pycore.pyidiagnosis.pydiagnosis.pyiemergence.pyexport.pyexport.pyiglyph_timing.pyglyph_timing.pyilearning_metrics.pylearning_metrics.pyilocal_coherence.pyphase_coherence.pyphase_compatibility.pyREADME.mdreporting.pyreporting.pyisense_index.pysense_index.pyitelemetry.pytetrad.pytrig_cache.pytrig_cache.pyitrig.pytrig.pyi
multiscale
__init__.pyhierarchical.pyREADME.md
navier_stokes
__init__.pyconservative_face.pyoperator.py
node
README.md
observers
README.md
operators
network_analysis
__init__.pysource_detection.py
postconditions
__init__.pymutation.py
preconditions
__init__.pycoherence.pydissonance.pyemission.pymutation.pyreception.pyresonance.py
strategies
__init__.pydefaults.pygpu_strategies.pystrategy.py
__init__.py__init__.pyialgebra.pycanonical_patterns.pycascade.pycoherence.pycontraction.pycoupling.pycycle_detection.pydefinitions_base.pydefinitions.pydefinitions.pyidissonance.pyemission.pyexpansion.pygrammar_application.pygrammar_canon.pygrammar_context.pygrammar_core.pygrammar_dynamics.pygrammar_error_factory.pygrammar_memoization.pygrammar_patterns.pygrammar_telemetry.pygrammar_types.pygrammar_u6.pygrammar_validate.pygrammar.pygrammar.pyihamiltonian.pyhealth_analyzer.pyintrospection.pyjitter.pyjitter.pyilifecycle.pymetabolism.pymetrics_basic.pymetrics_core.pymetrics_network.pymetrics_structural.pymetrics_u6.pymetrics.pymutation.pynodal_equation.pyoperator_contracts.pypattern_detection.pypatterns.pyREADME.mdreception.pyrecursivity.pyregistry.pyregistry.pyiremesh.pyremesh.pyiresonance.pyself_organization.pysilence.pystructural_units.pytransition.py
parallel
__init__.pyauto_scaler.pydistributed.pyengine.pymonitoring.pypartitioner.pyREADME.md
performance
guardrails.py
physics
__init__.py_helpers.pycalibration.pycanonical.pycell.pyclassical_mechanics.pyconservation_gauge_unification.pyconservation.pydissipative_conservation.pyemergent_chemistry.pyemergent_particles.pyextended.pyfields.pygauge.pyintegrity.pyinteractions.pylife.pylyapunov.pypatterns.pyphase_transition.pyquantum_mechanics.pyREADME.mdsignatures.pyspectral_conservation.pyspectral_metrics.pystructural_diffusion.pysymplectic_substrate.pytelemetry.pyunified.pyvariational.pyvectorized_ops.py
primality
__init__.py
recipes
__init__.pycookbook.pyREADME.md
riemann
__init__.pyadmissible_family_sweep.pyadmissible_rescaling.pyaggregates_closure_signature.pyalpha_sweep.pyanalytic_continuation_dirichlet.pyanalytic_continuation.pycoercivity_uniform.pycoupling_weights_type_signature.pycurrents_closure_signature.pydelta_phi_max_type_signature.pydirichlet_l.pydnfr_type_signature.pyepi_type_signature.pyhilbert_polya.pyli_keiper.pylyapunov_spectral_positivity.pynodal_pulse.pynodeaware_gauge_sweep.pynuf_type_signature.pyoperator_catalog_discipline_signature.pyoperator.pyoscillatory_correction.pypaley_gap_coercivity.pyphi_type_signature.pyprime_ladder_hamiltonian.pypulse_coherence.pyremesh_infinity_residue_split.pyremesh_window_type_signature.pyspectral_emergence.pystructural_zero_density.pytelemetry.pytetrad_closure_signature.pytwisted_admissible_family_sweep.pytwisted_admissible_rescaling.pytwisted_alpha_sweep.pytwisted_coercivity_uniform.pytwisted_hermite_family.pytwisted_hilbert_polya.pytwisted_li_keiper.pytwisted_lyapunov_spectral_positivity.pytwisted_nodeaware_gauge_sweep.pytwisted_oscillatory_correction.pytwisted_paley_gap_coercivity.pytwisted_prime_ladder_hamiltonian.pytwisted_spectral_emergence.pytwisted_structural_zero_density.pytwisted_weil_explicit_formula.pytwisted_weil_positivity.pyurules_consistency_signature.pyvon_mangoldt.pyweil_explicit_formula.pyweil_positivity.py
schemas
__init__.pygrammar.jsonREADME.md
sdk
__init__.py__init__.pyiadaptive_system.pyadaptive_system.pyibuilders.pybuilders.pyifluent.pyfluent.pyiREADME.mdself_opt.pysimple.pytemplates.pytemplates.pyiutils.py
security
__init__.pycrypto.pydatabase.pyREADME.mdsubprocess.pyvalidation.py
sequencing
__init__.pypatterns.pyREADME.md
services
__init__.pyorchestrator.pyREADME.md
sparse
__init__.pyREADME.mdrepresentations.py
structural
README.md
telemetry
__init__.pycache_metrics.pycache_metrics.pyiconstants.pynu_f.pynu_f.pyiREADME.mdunified_telemetry_system.pyverbosity.pyverbosity.pyi
tools
__init__.pydomain_templates.pyREADME.mdsequence_generator.pytnfr_is_prime_cli_optimized.pytnfr_is_prime_cli.py
topology
__init__.pyasymmetry.pyREADME.md
utils
cache_layers.pycache.pycache.pyicallbacks.pycallbacks.pyichunks.pychunks.pyidata.pydata.pyifast_diameter.pygraph.pygraph.pyiinit.pyinit.pyiio.pyio.pyinumeric.pynumeric.pyiREADME.mdtopology.pyunified_cache.py
validation
__init__.py__init__.pyiaggregator.pybase.pycompatibility.pycompatibility.pyiconfig.pygraph.pygraph.pyihealth.pyinput_validation.pyinterface_baselines.pyinvariants.pymultichannel_interface.pyphase_gate.pyREADME.mdrules.pyrules.pyiruntime.pyruntime.pyisequence_validator.pysignal_confrontation.pysoft_filters.pysoft_filters.pyispectral.pyspectral.pyistructural_interface.pytemporal_interface.pyunified_validation_system.pyvalidator.pywindow.pywindow.pyi
visualization
__init__.pycascade_viz.pyhierarchy.pyREADME.mdsequence_plotter.py
yang_mills
__init__.pyclosure.pyderivability.pyscaling.pystructural_gap.pyu6_sweep.py
__init__.py__init__.pyi_compat.py_version.py_version.pyialias.pyalias.pyibackend_config.pycache.pycache.pyiexecution.pyexecution.pyiflatten.pyflatten.pyigamma.pygamma.pyiglyph_history.pyglyph_history.pyiglyph_runtime.pyglyph_runtime.pyiimmutable.pyimmutable.pyiinitialization.pyinitialization.pyiio.pyio.pyilocking.pylocking.pyinode.pynode.pyiobservers.pyobservers.pyiontosim.pyontosim.pyipy.typedrng.pyrng.pyisecure_config.pyselector.pyselector.pyisense.pysense.pyistructural.pystructural.pyitokens.pytokens.pyitrace.pytrace.pyitypes.pytypes.pyiunits.pyunits.pyi
tetrad_evaluator.py
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FILE: src/tnfr/math/symbolic.py

symbolic.py

Symbolic Mathematics for TNFR.

Provides symbolic calculus tools for analyzing the nodal equation: ∂EPI/∂t = νf · ΔNFR

Key capabilities:

  • Symbolic differentiation and integration
  • Convergence analysis for U2 grammar rule
  • Bifurcation threshold analysis (∂²EPI/∂t²)
  • Analytical solutions for simple cases

Physics basis: AGENTS.md § Foundational Physics, TNFR.pdf § 2.1

Source Code

python
"""
Symbolic Mathematics for TNFR.

Provides symbolic calculus tools for analyzing the nodal equation:
    ∂EPI/∂t = νf · ΔNFR

Key capabilities:
- Symbolic differentiation and integration
- Convergence analysis for U2 grammar rule
- Bifurcation threshold analysis (∂²EPI/∂t²)
- Analytical solutions for simple cases

Physics basis: AGENTS.md § Foundational Physics, TNFR.pdf § 2.1
"""

import sympy as sp
from sympy import Derivative, Eq, Function, Integral, integrate, simplify, symbols

# ============================================================================
# SYMBOLIC VARIABLES (TNFR canonical)
# ============================================================================

# Time variable
t = symbols("t", real=True, positive=True)

# Structural frequency (Hz_str) - always positive
nu_f = symbols("nu_f", real=True, positive=True)

# Nodal gradient (reorganization pressure) - can be positive or negative
DELTA_NFR = symbols("DELTA_NFR", real=True)

# EPI as function of time
EPI = Function("EPI")

# Coherence
C = Function("C")

# Phase
phi = symbols("phi", real=True)

# ============================================================================
# NODAL EQUATION
# ============================================================================


def get_nodal_equation() -> Eq:
    """
    Return the canonical TNFR nodal equation.

    ∂EPI/∂t = νf · ΔNFR

    Returns:
        Sympy equation representing the fundamental TNFR dynamics

    Physics:
        - Rate of structural change = Reorganization capacity ×
          Structural pressure
        - νf = 0: Node frozen, cannot reorganize
        - ΔNFR = 0: Equilibrium, no drive to change
        - Both > 0: Active reorganization

    See: AGENTS.md § The Nodal Equation
    """
    return Eq(Derivative(EPI(t), t), nu_f * DELTA_NFR)


def solve_nodal_equation_constant_params(
    nu_f_val: float, delta_nfr_val: float, EPI_0: float, t0: float = 0
) -> sp.Expr:
    """
    Solve nodal equation analytically for constant νf and ΔNFR.

    Solution: EPI(t) = EPI_0 + νf · ΔNFR · (t - t0)

    Args:
        nu_f_val: Structural frequency (Hz_str)
        delta_nfr_val: Reorganization gradient
        EPI_0: Initial EPI value
        t0: Initial time

    Returns:
        Symbolic expression for EPI(t)

    Physics:
        Linear evolution when both parameters constant.
        Real systems have time-varying νf and ΔNFR.
    """
    eq = get_nodal_equation()
    # Substitute constant values
    eq_with_vals = eq.subs([(nu_f, nu_f_val), (DELTA_NFR, delta_nfr_val)])

    # Solve ODE
    solution = sp.dsolve(eq_with_vals, EPI(t))

    # Apply initial condition
    C1 = symbols("C1")
    solution_with_ic = solution.subs(C1, EPI_0 - nu_f_val * delta_nfr_val * t0)

    return solution_with_ic.rhs


# ============================================================================
# INTEGRATION AND CONVERGENCE (U2 Grammar Rule)
# ============================================================================


def integrated_evolution_symbolic() -> sp.Integral:
    """
    Return symbolic form of integrated nodal equation.

    EPI(t_f) = EPI(t_0) + ∫[t_0 to t_f] νf(τ) · ΔNFR(τ) dτ

    Returns:
        Symbolic integral expression

    Physics:
        For bounded evolution (coherence preservation):
            ∫ νf·ΔNFR dt < ∞  (convergence requirement)

        Without stabilizers (IL, THOL):
            - ΔNFR grows unbounded (positive feedback)
            - Integral diverges → system fragments

    See: AGENTS.md § U2: CONVERGENCE & BOUNDEDNESS
    """
    tau = symbols("tau", real=True, positive=True)
    t_0, t_f = symbols("t_0 t_f", real=True, positive=True)

    nu_f_func = Function("nu_f")
    delta_nfr_func = Function("DELTA_NFR")

    integrand = nu_f_func(tau) * delta_nfr_func(tau)

    return Integral(integrand, (tau, t_0, t_f))


def check_convergence_exponential(
    growth_rate: float, time_horizon: float
) -> tuple[bool, str, float | None]:
    """
    Check convergence for exponential ΔNFR growth.

    Models destabilizers without stabilizers:
        ΔNFR(t) = ΔNFR_0 · e^(λt)

    Args:
        growth_rate: λ (exponential rate)
        time_horizon: Integration limit

    Returns:
        (converges, explanation, integral_value)

    Physics:
        - λ < 0: Decaying → converges (stabilized)
        - λ = 0: Constant → converges (equilibrium)
        - λ > 0: Growing → diverges (needs stabilizers!)

    Grammar: Validates U2 requirement for stabilizers
    """
    lambda_sym = symbols("lambda", real=True)
    tau = symbols("tau", real=True, positive=True)
    DELTA_NFR_0 = symbols("DELTA_NFR_0", real=True, positive=True)
    T = symbols("T", real=True, positive=True)

    # Exponential growth model
    delta_nfr_exp = DELTA_NFR_0 * sp.exp(lambda_sym * tau)

    # Assume constant νf for simplicity
    integrand = nu_f * delta_nfr_exp

    # Integrate
    integral = integrate(integrand, (tau, 0, T))
    integral_simplified = simplify(integral)

    # Substitute actual values
    integral_value = integral_simplified.subs(
        [
            (lambda_sym, growth_rate),
            (T, time_horizon),
            (nu_f, 1.0),  # Normalized
            (DELTA_NFR_0, 1.0),
        ]
    )

    converges = growth_rate <= 0

    if growth_rate < 0:
        explanation = f"Converges: λ={growth_rate} < 0 (decaying, stabilized)"
    elif growth_rate == 0:
        explanation = f"Converges: λ={growth_rate} = 0 (constant, equilibrium)"
    else:
        explanation = f"DIVERGES: λ={growth_rate} > 0 (growing, NEEDS STABILIZERS!)"

    try:
        val = float(integral_value)
    except (TypeError, ValueError):
        val = None

    return converges, explanation, val


# ============================================================================
# BIFURCATION ANALYSIS (U4 Grammar Rule)
# ============================================================================


def compute_second_derivative_symbolic() -> Derivative:
    """
    Return second derivative of EPI for bifurcation analysis.

    ∂²EPI/∂t² = ∂(νf · ΔNFR)/∂t = (∂νf/∂t)·ΔNFR + νf·(∂ΔNFR/∂t)

    Returns:
        Symbolic second derivative expression

    Physics:
        Bifurcation trigger: ∂²EPI/∂t² > τ (threshold)

        High second derivative indicates:
        - Rapid acceleration of reorganization
        - Potential phase transition
        - Need for handlers (THOL, IL) per U4a

    See: AGENTS.md § U4: BIFURCATION DYNAMICS
    """
    # First derivative (nodal equation)
    nu_f * DELTA_NFR

    # Second derivative (product rule)
    nu_f_func = Function("nu_f")
    delta_nfr_func = Function("DELTA_NFR")

    # ∂²EPI/∂t² = d/dt(νf · ΔNFR)
    second_deriv = Derivative(nu_f_func(t), t) * delta_nfr_func(t) + nu_f_func(
        t
    ) * Derivative(delta_nfr_func(t), t)

    return second_deriv


def evaluate_bifurcation_risk(
    nu_f_val: float,
    delta_nfr_val: float,
    d_nu_f_dt: float,
    d_delta_nfr_dt: float,
    threshold: float = 1.0,
) -> tuple[bool, float, str]:
    """
    Evaluate if system is near bifurcation threshold.

    Args:
        nu_f_val: Current structural frequency
        delta_nfr_val: Current reorganization gradient
        d_nu_f_dt: Rate of change of νf
        d_delta_nfr_dt: Rate of change of ΔNFR
        threshold: Bifurcation threshold τ

    Returns:
        (at_risk, second_derivative_value, recommendation)

    Physics:
        ∂²EPI/∂t² = (∂νf/∂t)·ΔNFR + νf·(∂ΔNFR/∂t)

        If > τ: Apply handlers (THOL, IL) per U4a

    Grammar: Validates U4a requirement
    """
    # Compute second derivative
    second_deriv_val = d_nu_f_dt * delta_nfr_val + nu_f_val * d_delta_nfr_dt

    at_risk = abs(second_deriv_val) > threshold

    if at_risk:
        recommendation = (
            f"⚠️ BIFURCATION RISK: |∂²EPI/∂t²| = {abs(second_deriv_val):.4f} > τ = {threshold}\n"
            f"ACTION REQUIRED: Apply handlers {{THOL, IL}} per U4a grammar rule"
        )
    else:
        recommendation = (
            f"✓ Stable: |∂²EPI/∂t²| = {abs(second_deriv_val):.4f} ≤ τ = {threshold}\n"
            f"System within normal reorganization regime"
        )

    return at_risk, second_deriv_val, recommendation


# ============================================================================
# UTILITIES
# ============================================================================


def latex_export(expr: sp.Expr) -> str:
    """
    Export symbolic expression to LaTeX format.

    Args:
        expr: Sympy expression

    Returns:
        LaTeX string for documentation/papers
    """
    return sp.latex(expr)


def pretty_print(expr: sp.Expr) -> str:
    """
    Pretty-print symbolic expression.

    Args:
        expr: Sympy expression

    Returns:
        Human-readable string representation
    """
    return sp.pretty(expr)


# ============================================================================
# EXAMPLE USAGE AND VALIDATION
# ============================================================================

if __name__ == "__main__":
    print("=" * 70)
    print("TNFR Symbolic Mathematics Module")
    print("=" * 70)

    # 1. Display nodal equation
    print("\n1. CANONICAL NODAL EQUATION:")
    nodal_eq = get_nodal_equation()
    print(pretty_print(nodal_eq))
    print(f"LaTeX: {latex_export(nodal_eq)}")

    # 2. Solve for constant parameters
    print("\n2. ANALYTICAL SOLUTION (constant νf, ΔNFR):")
    solution = solve_nodal_equation_constant_params(
        nu_f_val=2.0, delta_nfr_val=0.5, EPI_0=1.0, t0=0  # 2 Hz_str
    )
    print(f"EPI(t) = {solution}")

    # 3. Convergence analysis
    print("\n3. CONVERGENCE ANALYSIS (U2 Grammar):")
    print("\nCase A: Stabilized (λ = -0.1)")
    conv_a, exp_a, val_a = check_convergence_exponential(-0.1, 10.0)
    print(f"  {exp_a}")
    print(f"  Integral value: {val_a:.4f}")

    print("\nCase B: Divergent (λ = +0.1) - NEEDS STABILIZERS!")
    conv_b, exp_b, val_b = check_convergence_exponential(0.1, 10.0)
    print(f"  {exp_b}")
    if val_b:
        print(f"  Integral value: {val_b:.4f}")

    # 4. Bifurcation analysis
    print("\n4. BIFURCATION ANALYSIS (U4 Grammar):")
    print("\nCase A: Normal operation")
    risk_a, deriv_a, rec_a = evaluate_bifurcation_risk(
        nu_f_val=1.0,
        delta_nfr_val=0.3,
        d_nu_f_dt=0.1,
        d_delta_nfr_dt=0.2,
        threshold=1.0,
    )
    print(rec_a)

    print("\nCase B: High acceleration - bifurcation risk")
    risk_b, deriv_b, rec_b = evaluate_bifurcation_risk(
        nu_f_val=2.0,
        delta_nfr_val=1.5,
        d_nu_f_dt=0.5,
        d_delta_nfr_dt=1.0,
        threshold=1.0,
    )
    print(rec_b)

    # 5. Second derivative formula
    print("\n5. SECOND DERIVATIVE (Bifurcation Indicator):")
    second_deriv = compute_second_derivative_symbolic()
    print(pretty_print(second_deriv))

    print("\n" + "=" * 70)
    print("✓ Symbolic module operational - Ready for TNFR analysis")
    print("=" * 70)