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Resonant Fractal Nature Theory — a mathematical framework for coherent patterns on graph-coupled networks.

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© 2026 TNFR project — MIT licensed.DOI 10.5281/zenodo.17602860
docs
grammar
PHYSICS_VERIFICATION.md
API_CONTRACTS.mdCANONICAL_OZ_SEQUENCES.mdEMPIRICAL_CONFRONTATION_EEG.mdREADME.mdSTRUCTURAL_FIELDS_TETRAD.mdSTRUCTURAL_INTERFACE_THEORY.md
theory
APPLIED_STRUCTURAL_ANALYSIS.mdCATALOG_TYPE_HYGIENE_PROGRAMME.mdDISSIPATIVE_AND_OPEN_SYSTEMS.mdEMERGENT_ONTOLOGY.mdEXTENDED_FIELDS_AND_DERIVED_QUANTITIES.mdFUNDAMENTAL_THEORY.mdGAUGE_SYMMETRY_AND_UNIFICATION.mdGLOSSARY.mdMATHEMATICAL_DYNAMICS_BASIS.mdMINIMAL_STRUCTURAL_DEGREES.mdNUCLEUS_A_PRIME_LADDER_ATLAS.mdNUCLEUS_B_EQUIVARIANCE_OBSTRUCTIONS.mdPHYSICAL_REGIME_CORRESPONDENCES.mdREADME.mdREMESH_INFINITY_DERIVATION.mdSTRUCTURAL_CONSERVATION_THEOREM.mdSTRUCTURAL_OPERATORS.mdSTRUCTURAL_STABILITY_AND_DYNAMICS.mdTNFR_BSD_RESEARCH_NOTES.mdTNFR_HODGE_RESEARCH_NOTES.mdTNFR_NAVIER_STOKES_RESEARCH_NOTES.mdTNFR_NUMBER_THEORY.mdTNFR_P_VS_NP_RESEARCH_NOTES.mdTNFR_RIEMANN_RESEARCH_NOTES.mdTNFR_VARIATIONAL_PRINCIPLE.mdTNFR_YANG_MILLS_RESEARCH_NOTES.mdTNFR.pdfUNIFIED_GRAMMAR_RULES.md
factorization-lab
analysis
analyze_patterns.pycertificate_manifest.py
benchmarks
benchmark_analysis.pybenchmark_expansion_suite.pyfull_spectrum_factorization.pypaley_gap_extended.pypaley_gap_smoke.pytest_benchmark_suite.py
demos
experiment_contexts
exp_0b1663cd19b7.jsonexp_0bf0054b7474.jsonexp_75a4c8ca616a.jsonexp_848ee0fd1857.jsonexp_f6fe00562193.jsonexp_fdf3da424e1e.json
failure_telemetry_batch.pyfeedback_integration_demo.pyintegration_demo_snapshots.dbseed_management_integration_demo.pysnapshot_integration_demo.pytrajectory_143.jsontrajectory_77.jsontrajectory_89.jsontrajectory_91.jsontrajectory_97.json
docs
FACTORING_PLAYBOOK.mdFALSE_POSITIVE_TEST_SUITE.mdOPERATOR_CERTIFICATES.mdROADMAP.mdSPECTRAL_ROUTE.md
experiment_contexts
exp_cebe1d9e7d8e.json
notebooks
spectral_history.ipynb
scripts
run_false_positive_tests.py
tests
run_false_positive_test_suite.pytest_cli.pytest_false_positive_methodology.pytest_false_positive_verifier.pytest_feedback_integration.pytest_partitioning.pytest_seed_management.pytest_self_opt_support.pytest_snapshot_system.pytest_spectral_paley.pytest_verification_robustness.py
tnfr_factorization
__init__.pyapi.pycli.pyfailure_telemetry.pyfeedback_adapter.pyfeedback_integration.pypartitioning.pyself_opt_support.pyspectral_paley.py
demo_snapshots.dbLICENSE_SNAPSHOT.mdPACKAGE_SUMMARY.mdREADME.mdseed_management.pysnapshot_system.pytest_certificate_hashing.pytest_installation.pyverification_trajectory_77.json
benchmarks
analyze_tetrad_universality.pyb0star_alpha_canonical_product_graphs.pybenchmark_optimization_tracks.pybenchmark_utils.pyboundary_vibration.pybridge_primes_riemann.pychiral_involution.pycli_utils.pycoherence_projector_sense_index.pycommutant_bridge.pycomposition_arithmetic.pyconfinement_zones_test.pyconservation_law_validation.pydirected_paley_bridge.pyemergent_arithmetic_pulse.pyemergent_atom_dynamics.pyemergent_atomic_shells.pyemergent_base_dimension.pyemergent_dimension_dynamics.pyemergent_fractal_pulse.pyemergent_fractal_simplex_dimension.pyemergent_integers_symmetry.pyemergent_musical_nfr.pyemergent_nfr_geometry.pyemergent_nfr_where.pyemergent_rationals.pyemergent_rhythm.pyemergent_screening.pyemergent_shell_cardinals.pyemergent_shell_ordering.pyemergent_simplex_dimension.pyemergent_substrate_symmetry.pyequivariance_wall.pyexternal_phase_gate_validation.pyfield_methods_battery.pygolden_residue_remesh_bridge.pyintegrated_force_regime_study.pyinverse_spectrum_to_symmetry.pyk_phi_safety_demo.pykuramoto_farey_bridge.pymissing_piece_bridge.pymultichannel_interface_benchmark.pynavier_stokes_recipe_bridge.pynodal_propagator_residue_bridge.pyns_moment_hierarchy_cascade.pyoperational_irreducibility.pypaley_bridge.pyphase_curvature_investigation.pyphase_wall.pyphi_s_confinement_investigation.pyprimes_as_consequence.pypulse_phase_coherence_budget.pyREADME.mdremesh_infinity_riemann_baseline.pyremesh_infinity_riemann_composed.pyremesh_infinity_riemann_modified_graph.pyremesh_infinity_riemann_operator.pyremesh_infinity_riemann_spectral_basis.pyremesh_infinity_riemann_spectral_robustness.pyremesh_infinity_riemann_spectral.pyresidue_phase_vs_riemann.pystructural_interface_benchmark.pytemporal_interface_benchmark.pytetrad_results_aggregate.pyu2_destabilization_irreversibility.pyuniversality_clusters.pyxi_c_fast_experiment.py
primality-test
benchmarks
comprehensive_benchmark.py
docs
ADVANCED_INTEGRATION.mdmathematical_foundation.mdperformance_analysis.md
examples
advanced_examples.pybasic_usage.py
tnfr_primality
__init__.py__main__.pyadvanced_cli.pyadvanced_core.pycli.pyconstants.pycore.pyoptimized.py
MANIFEST.inPACKAGE_SUMMARY.mdREADME.mdRELEASE_NOTES_v1.0.mdsetup.pytest_installation.py
tests
core_physics
__init__.pytest_conservation_laws.pytest_delta_nfr_computation_paths.pytest_delta_nfr.pytest_dispersion_coherence_sign_invariance.pytest_emergent_constants_guard.pytest_lyapunov_operators.pytest_nodal_equation.pytest_structural_triad.py
data
replay_manifests
sample_run
_manifest_summary.json_manifest.json_partition_files.txt.gz
self_opt_validation
seed_alpha
paley.json
seed_beta
integration.json
seed_gamma
unknown.json
self_optimization
test_run
partitioned
test_run
test_run_p0.jsontest_run_p1.json
_manifest_summary.json_manifest.json
engines
test_pattern_discovery_manifest.pytest_self_optimization_engine.py
mathematics
__init__.pytest_autodiff.pytest_backends.pytest_dissipative_dynamics.pytest_epi.pytest_factory_patterns.pytest_metrics.pytest_navier_stokes_refounded.pytest_number_theory_canonical.pytest_operators.pytest_residue_networks.pytest_riemann_nodal_pulse.pytest_riemann_pulse_coherence.pytest_spaces.pytest_transforms.pytest_validator.py
operators
test_canonical_operators_modern.pytest_grammar_canon.pytest_grammar_canonical_consistency.pytest_grammar_dynamics.pytest_operator_contracts.pytest_operator_strategies.py
parallel
test_fractal_partition_manifest.py
physics
test_conservation_gauge_unification.pytest_dissipative_conservation.pytest_emergent_chemistry.pytest_field_cache_invalidation.pytest_gauge.pytest_phase_transition.pytest_signatures.pytest_spectral_conservation.pytest_structural_diffusion.pytest_structural_integrity.pytest_symplectic_substrate.pytest_tetrad_bounds.pytest_variational.pytest_yang_mills_closure.pytest_yang_mills_derivability.pytest_yang_mills_scaling.pytest_yang_mills_structural_gap.pytest_yang_mills_u6_sweep.py
scripts
test_run_self_opt_validation.pytest_run_self_optimization.py
sdk
__init__.pytest_simple_advanced.py
__init__.pyconftest.pyREADME.mdtest_breast_cancer_phase_gate_demo.pytest_classical_mechanics.pytest_distributed_fft.pytest_external_phase_gate_validation.pytest_factorization_entrypoint.pytest_multichannel_interface.pytest_nodal_optimizer.pytest_phase_gate_api.pytest_replay_register_manifest.pytest_signal_confrontation.pytest_structural_interface_api.pytest_structural_interface_baselines.pytest_structural_interface_benchmark.pytest_temporal_interface.pytest_vectorized_coherence_length_regression.pytest_wine_quality_phase_gate_demo.pyutils.py
examples
01_foundations
01_hello_world.py02_musical_resonance.py03_network_formation.py04_operator_sequences.py05_coherence_evolution.py06_network_topologies.py07_phase_transitions.py08_emergent_phenomena.py09_visualization_suite.py10_simplified_sdk_showcase.py
02_physics_regimes
11_classical_limit_comparison.py115_operator_contract_audit.py12_classical_mechanics_demo.py13_quantum_mechanics_demo.py14_uncertainty_and_interference.py15_train_crossing_demo.py17_conservation_law_demo.py26_gauge_structure_demo.py27_variational_principle_demo.py28_dissipative_systems_demo.py29_lyapunov_stability_demo.py30_self_optimization_demo.py31_mathematical_constants_basis.py33_complex_field_unification.py34_conservation_protocol_suite.py35_tetrad_irreducibility.py36_grammar_violation_detector.py37_operator_tetrad_synergy.py38_grammar_energy_landscape.py39_nodal_equation_decomposition.py
03_riemann_zeta
157_nodal_pulse_phase_attack.py41_von_mangoldt_zeta_demo.py42_riemann_zeros_as_resonances.py43_prime_ladder_hamiltonian_demo.py44_weil_explicit_formula_demo.py45_li_keiper_demo.py46_weil_tnfr_positivity_demo.py47_alpha_sweep_demo.py48_admissible_family_sweep_demo.py49_nodeaware_gauge_sweep_demo.py50_uniform_coercivity_demo.py51_adaptive_coercivity_demo.py52_paley_gap_coercivity_demo.py53_lyapunov_spectral_positivity_demo.py54_hilbert_polya_demo.py55_structural_zero_density_demo.py56_spectral_emergence_demo.py57_admissible_rescaling_demo.py58_oscillatory_correction_demo.py
04_riemann_L_twisted
59_dirichlet_l_function_demo.py60_dirichlet_l_continuation_demo.py61_dirichlet_l_hamiltonian_demo.py62_dirichlet_weil_explicit_formula_demo.py63_dirichlet_li_keiper_demo.py64_twisted_weil_positivity_demo.py65_twisted_alpha_sweep_demo.py66_twisted_admissible_family_sweep_demo.py67_twisted_nodeaware_gauge_sweep_demo.py68_twisted_hermite_family_demo.py69_twisted_coercivity_uniform_demo.py70_twisted_paley_gap_coercivity_demo.py71_twisted_lyapunov_spectral_demo.py72_twisted_hilbert_polya_demo.py73_twisted_structural_zero_density_demo.py74_twisted_spectral_emergence_demo.py75_twisted_admissible_rescaling_demo.py76_twisted_oscillatory_correction_demo.py
05_type_hygiene
77_remesh_infinity_residue_split_demo.py78_nuf_type_signature_demo.py79_epi_type_signature_demo.py80_phi_type_signature_demo.py81_dnfr_type_signature_demo.py82_remesh_window_type_signature_demo.py83_delta_phi_max_type_signature_demo.py84_coupling_weights_type_signature_demo.py85_tetrad_closure_signature_demo.py86_currents_closure_signature_demo.py87_aggregates_closure_signature_demo.py88_urules_consistency_signature_demo.py89_operator_catalog_discipline_signature_demo.py
06_navier_stokes
158_navier_stokes_two_face_refounded.py
07_number_theory
100_prime_families_orbits.py101_numbers_as_coupled_network.py102_nodal_flow_primes_equilibria.py116_nuf_emergent_prime_visibility.py146_primality_grammatical_inertness.py147_numbers_as_free_monoid_words.py148_capacity_arm_carries_von_mangoldt.py149_p14_is_the_capacity_arm_operator.py153_structural_frequency_rank_cyclotomy.py40_arithmetic_number_theory.py94_generative_number_construction.py95_primes_from_spectral_waves.py96_spectral_vibration_of_coherence.py97_goldbach_additive_multiplicative.pyemergent_chemistry_particles_demo.py
08_emergent_geometry
103_emergent_substrate_meets_riemann.py106_per_node_polarization_geometry.py107_orthogonal_structure_emergent_geometry.py108_emergent_field_generating_structure.py112_structure_predicts_coherence_flow.py113_overdamped_projection_bridge.py114_substrate_conserved_quantities.py117_emergent_geometry_residue_graph.py118_emergent_vs_classical_operator.py119_phase_sector_directed_residue.py120_symmetry_wall_substrate_vs_spectrum.py121_canonical_symmetry_break_negative.py122_factorization_phase_sector.py123_symmetry_sector_decomposition.py124_emergent_metric_fractal_consistency.py125_node_is_the_emergent_substrate.py126_two_layers_base_fiber.py127_base_is_emergent_not_imposed.py128_base_substrate_coemergence.py129_spectral_gap_base_fiber_clock.py130_operators_break_substrate_charges.py131_coemergent_loop_convergence.py132_geometric_phase_holonomy.py133_psi_topological_defects.py134_spectral_dimension_heat_kernel.py135_arrow_of_time_h_theorem.py136_heat_kernel_coefficients.py137_synchronization_transition.py138_structure_frequency_synchronization.py139_grammar_formal_language.py140_grammar_automaton.py141_grammar_rule_decomposition.py142_grammar_operator_quotient.py143_glyphic_function_sublanguage.py144_branching_combinator.py145_syntactic_monoid_starfree.py150_emergent_grammatical_pattern_parry.py151_grammar_in_emergent_geometry.py152_operator_contract_tetrahedron.py154_conductor_annotated_qr_spectrum.py155_ontological_position_of_numbers.py156_emergence_directness_law.py98_emergent_symplectic_substrate.py99_structural_diffusion.pyunified_fields_showcase.py
09_millennium
109_p_vs_np_coherence_synthesis.py110_bsd_rank_structural_pressure.py111_hodge_discrete_and_honest_gap.py
10_applications
159_empirical_confrontation_pipeline.py90_phase_gate_monitor_demo.py91_breast_cancer_phase_gate_demo.py92_wine_quality_phase_gate_demo.py93_structural_interface_demo.pypytorch_cuda_demo.py
README.md
scripts
replay
__init__.pyregister_manifest.py
__init__.pyREADME.mdrebuild_failure_manifest.pyrun_reproducible_benchmarks.pyrun_self_opt_validation.pyrun_self_optimization.pytnfr_is_prime.pyvalidate_conservation_law.pyverify_internal_references.py
src
core
__init__.pyevaluation.py
tnfr
backends
__init__.pyjax_backend.pynumpy_backend.pyoptimized_numpy.pyREADME.mdtorch_backend.py
cli
__init__.py__init__.pyiarguments.pyarguments.pyiexecution.pyexecution.pyiinteractive_validator.pyREADME.mdutils.pyutils.pyi
compat
__init__.pydataclass.pyjsonschema_stub.pymatplotlib_stub.pynumpy_stub.pyREADME.md
config
__init__.py__init__.pyiconstants.pyconstants.pyidefaults_core.pydefaults_init.pydefaults_metric.pydefaults.pyfeature_flags.pyfeature_flags.pyiglyph_constants.pyoperator_names.pyoperator_names.pyiphysics_derivation.pyprecision_modes.pypresets.pypresets.pyiREADME.mdsecurity.pythresholds.pytnfr_config.py
constants
__init__.py__init__.pyialiases.pyaliases.pyicanonical.pymetric.pymetric.pyioperational.py
core
__init__.pycontainer.pydefault_implementations.pyexceptions.pyinterfaces.pyREADME.md
dynamics
__init__.py__init__.pyiadaptation.pyadaptation.pyiadaptive_sequences.pyadaptive_sequences.pyiadelic.pyadvanced_cache_optimizer.pyadvanced_fft_arithmetic.pyaliases.pyaliases.pyibifurcation.pycache_aware_fft_engine.pycanonical.pycanonical.pyicomputational_hub.pycoordination.pycoordination.pyidistributed_fft.pydnfr.pydnfr.pyidynamic_limits.pyemergent_centralization.pyemergent_integration_engine.pyfeedback.pyfeedback.pyifft_backend.pyfft_cache_coordinator.pyfft_dispatchers.pyfft_engine.pyfft_workers.pyfused_dnfr.pyhomeostasis.pyhomeostasis.pyiintegrators.pyintegrators.pyilearning.pylearning.pyimetabolism.pymulti_modal_cache.pynbody_tnfr.pynbody.pynodal_optimizer.pyoptimization_orchestrator.pypropagation.pyREADME.mdruntime.pyruntime.pyisampling.pysampling.pyiselectors.pyselectors.pyiself_optimizing_engine.pyspectral_structural_fusion.pystructural_cache.pystructural_clip.pysymplectic.pyunified_backend.pyunified_mathematical_cache_orchestrator.py
engines
computation
__init__.pyfft_engine.pyunified_fft_engine.pyunified_gpu_system.py
constants
__init__.pycanonical.pyoperational.py
integration
__init__.pyemergent_integration.py
pattern_discovery
__init__.pymathematical_patterns.pymulti_modal_cache.py
self_optimization
__init__.pyengine.py
__init__.pyREADME.md
errors
__init__.pycontextual.py
factorization
__init__.py
flatten
README.md
gamma
README.md
glyph_history
README.md
glyph_runtime
README.md
immutable
README.md
initialization
README.md
io
README.md
math
__init__.pyfields_symbolic.pygrammar_validators.pyoptimizer.pyREADME.mdsymbolic.py
mathematics
__init__.pybackend.pybackend.pyidynamics.pydynamics.pyiepi.pyepi.pyigenerators.pygenerators.pyiliouville.pymetrics.pymetrics.pyinumber_theory.pyoperators_factory.pyoperators_factory.pyioperators.pyoperators.pyioptimized_primality.pyprojection.pyprojection.pyiREADME.mdruntime.pyruntime.pyispaces.pyspaces.pyispectral.pytransforms.pytransforms.pyiunified_cache.pyunified_numerical.pyzeta.py
metrics
__init__.py__init__.pyibuffer_cache.pybuffer_cache.pyicache_utils.pycoherence.pycoherence.pyicommon.pycommon.pyicore.pycore.pyidiagnosis.pydiagnosis.pyiemergence.pyexport.pyexport.pyiglyph_timing.pyglyph_timing.pyilearning_metrics.pylearning_metrics.pyilocal_coherence.pyphase_coherence.pyphase_compatibility.pyREADME.mdreporting.pyreporting.pyisense_index.pysense_index.pyitelemetry.pytetrad.pytrig_cache.pytrig_cache.pyitrig.pytrig.pyi
multiscale
__init__.pyhierarchical.pyREADME.md
navier_stokes
__init__.pyconservative_face.pyoperator.py
node
README.md
observers
README.md
operators
network_analysis
__init__.pysource_detection.py
postconditions
__init__.pymutation.py
preconditions
__init__.pycoherence.pydissonance.pyemission.pymutation.pyreception.pyresonance.py
strategies
__init__.pydefaults.pygpu_strategies.pystrategy.py
__init__.py__init__.pyialgebra.pycanonical_patterns.pycascade.pycoherence.pycontraction.pycoupling.pycycle_detection.pydefinitions_base.pydefinitions.pydefinitions.pyidissonance.pyemission.pyexpansion.pygrammar_application.pygrammar_canon.pygrammar_context.pygrammar_core.pygrammar_dynamics.pygrammar_error_factory.pygrammar_memoization.pygrammar_patterns.pygrammar_telemetry.pygrammar_types.pygrammar_u6.pygrammar_validate.pygrammar.pygrammar.pyihamiltonian.pyhealth_analyzer.pyintrospection.pyjitter.pyjitter.pyilifecycle.pymetabolism.pymetrics_basic.pymetrics_core.pymetrics_network.pymetrics_structural.pymetrics_u6.pymetrics.pymutation.pynodal_equation.pyoperator_contracts.pypattern_detection.pypatterns.pyREADME.mdreception.pyrecursivity.pyregistry.pyregistry.pyiremesh.pyremesh.pyiresonance.pyself_organization.pysilence.pystructural_units.pytransition.py
parallel
__init__.pyauto_scaler.pydistributed.pyengine.pymonitoring.pypartitioner.pyREADME.md
performance
guardrails.py
physics
__init__.py_helpers.pycalibration.pycanonical.pycell.pyclassical_mechanics.pyconservation_gauge_unification.pyconservation.pydissipative_conservation.pyemergent_chemistry.pyemergent_particles.pyextended.pyfields.pygauge.pyintegrity.pyinteractions.pylife.pylyapunov.pypatterns.pyphase_transition.pyquantum_mechanics.pyREADME.mdsignatures.pyspectral_conservation.pyspectral_metrics.pystructural_diffusion.pysymplectic_substrate.pytelemetry.pyunified.pyvariational.pyvectorized_ops.py
primality
__init__.py
recipes
__init__.pycookbook.pyREADME.md
riemann
__init__.pyadmissible_family_sweep.pyadmissible_rescaling.pyaggregates_closure_signature.pyalpha_sweep.pyanalytic_continuation_dirichlet.pyanalytic_continuation.pycoercivity_uniform.pycoupling_weights_type_signature.pycurrents_closure_signature.pydelta_phi_max_type_signature.pydirichlet_l.pydnfr_type_signature.pyepi_type_signature.pyhilbert_polya.pyli_keiper.pylyapunov_spectral_positivity.pynodal_pulse.pynodeaware_gauge_sweep.pynuf_type_signature.pyoperator_catalog_discipline_signature.pyoperator.pyoscillatory_correction.pypaley_gap_coercivity.pyphi_type_signature.pyprime_ladder_hamiltonian.pypulse_coherence.pyremesh_infinity_residue_split.pyremesh_window_type_signature.pyspectral_emergence.pystructural_zero_density.pytelemetry.pytetrad_closure_signature.pytwisted_admissible_family_sweep.pytwisted_admissible_rescaling.pytwisted_alpha_sweep.pytwisted_coercivity_uniform.pytwisted_hermite_family.pytwisted_hilbert_polya.pytwisted_li_keiper.pytwisted_lyapunov_spectral_positivity.pytwisted_nodeaware_gauge_sweep.pytwisted_oscillatory_correction.pytwisted_paley_gap_coercivity.pytwisted_prime_ladder_hamiltonian.pytwisted_spectral_emergence.pytwisted_structural_zero_density.pytwisted_weil_explicit_formula.pytwisted_weil_positivity.pyurules_consistency_signature.pyvon_mangoldt.pyweil_explicit_formula.pyweil_positivity.py
schemas
__init__.pygrammar.jsonREADME.md
sdk
__init__.py__init__.pyiadaptive_system.pyadaptive_system.pyibuilders.pybuilders.pyifluent.pyfluent.pyiREADME.mdself_opt.pysimple.pytemplates.pytemplates.pyiutils.py
security
__init__.pycrypto.pydatabase.pyREADME.mdsubprocess.pyvalidation.py
sequencing
__init__.pypatterns.pyREADME.md
services
__init__.pyorchestrator.pyREADME.md
sparse
__init__.pyREADME.mdrepresentations.py
structural
README.md
telemetry
__init__.pycache_metrics.pycache_metrics.pyiconstants.pynu_f.pynu_f.pyiREADME.mdunified_telemetry_system.pyverbosity.pyverbosity.pyi
tools
__init__.pydomain_templates.pyREADME.mdsequence_generator.pytnfr_is_prime_cli_optimized.pytnfr_is_prime_cli.py
topology
__init__.pyasymmetry.pyREADME.md
utils
cache_layers.pycache.pycache.pyicallbacks.pycallbacks.pyichunks.pychunks.pyidata.pydata.pyifast_diameter.pygraph.pygraph.pyiinit.pyinit.pyiio.pyio.pyinumeric.pynumeric.pyiREADME.mdtopology.pyunified_cache.py
validation
__init__.py__init__.pyiaggregator.pybase.pycompatibility.pycompatibility.pyiconfig.pygraph.pygraph.pyihealth.pyinput_validation.pyinterface_baselines.pyinvariants.pymultichannel_interface.pyphase_gate.pyREADME.mdrules.pyrules.pyiruntime.pyruntime.pyisequence_validator.pysignal_confrontation.pysoft_filters.pysoft_filters.pyispectral.pyspectral.pyistructural_interface.pytemporal_interface.pyunified_validation_system.pyvalidator.pywindow.pywindow.pyi
visualization
__init__.pycascade_viz.pyhierarchy.pyREADME.mdsequence_plotter.py
yang_mills
__init__.pyclosure.pyderivability.pyscaling.pystructural_gap.pyu6_sweep.py
__init__.py__init__.pyi_compat.py_version.py_version.pyialias.pyalias.pyibackend_config.pycache.pycache.pyiexecution.pyexecution.pyiflatten.pyflatten.pyigamma.pygamma.pyiglyph_history.pyglyph_history.pyiglyph_runtime.pyglyph_runtime.pyiimmutable.pyimmutable.pyiinitialization.pyinitialization.pyiio.pyio.pyilocking.pylocking.pyinode.pynode.pyiobservers.pyobservers.pyiontosim.pyontosim.pyipy.typedrng.pyrng.pyisecure_config.pyselector.pyselector.pyisense.pysense.pyistructural.pystructural.pyitokens.pytokens.pyitrace.pytrace.pyitypes.pytypes.pyiunits.pyunits.pyi
tetrad_evaluator.py
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FILE: src/tnfr/physics/interactions.py

interactions.py

Canonical interaction sequences composed from TNFR operators (centralized).

Overview

This module provides physics-first helpers that compose structural operators into interaction-like sequences while enforcing unified grammar awareness (U1–U6) and instrumenting read-only telemetry via the Structural Field Tetrad (Φ_s, |∇φ|, K_φ, ξ_C). These helpers are thin orchestrators and never mutate EPI directly; they invoke canonical operators from tnfr.operators.definitions.

Operator–Grammar Mapping (informative):

  • Coupling (UM): requires phase verification (U3) inside operator
  • Resonance (RA): propagates EPI coherently; phase-aware (U3)
  • Coherence (IL): stabilizer enforcing boundedness (U2)
  • Dissonance (OZ): controlled destabilizer; must be followed by handlers (U4a)
  • Mutation (ZHIR): transformer at threshold; requires recent OZ and prior IL (U4b)
  • SelfOrganization (THOL): creates sub-EPIs; stabilizer and transformer (U2, U4)
  • Silence (SHA): closure/observation window (U1b)

Telemetry (read-only):

  • |∇φ|: phase gradient; early stress indicator (threshold ≈ 0.38)
  • K_φ: phase curvature (part of unified Ψ); confinement hotspots (|K_φ| ≥ 2.8274)
  • Φ_s: structural potential; mean absolute drift as passive safety (ΔΦ_s < π/2)

Contracts (summary):

  • EM-like: [UM → RA → IL]. Preserve identity; phase-verified coupling (U3).
  • Weak-like: [IL? → OZ → ZHIR → IL]. U4b-compliant (prior IL + recent OZ).
  • Strong-like: [UM → IL → THOL]. Curvature-driven confinement; post-coupling IL.
  • Gravity-like: [IL → SHA?]. Telemetry-oriented stabilization (Φ_s drift only).

Usage pattern

Given a graph G with phase (theta/phase) and ΔNFR (delta_nfr/dnfr) attributes set (e.g., via tnfr.physics.patterns), call one of the helpers with an iterable of nodes. Results contain operator names applied and key telemetry means before/after, plus optional warnings when thresholds are exceeded.

Notes

  • English-only documentation for canonicity and single source-of-truth alignment.
  • Extend carefully with physics-first justification and tests. Keep parameters minimal and respect U-rules and structural invariants at all times.

Source Code

python
"""Canonical interaction sequences composed from TNFR operators (centralized).

Overview
--------
This module provides physics-first helpers that compose structural operators
into interaction-like sequences while enforcing unified grammar awareness
(U1–U6) and instrumenting read-only telemetry via the Structural Field Tetrad
(Φ_s, |∇φ|, K_φ, ξ_C). These helpers are thin orchestrators and never mutate
EPI directly; they invoke canonical operators from
``tnfr.operators.definitions``.

Operator–Grammar Mapping (informative):
- Coupling (UM): requires phase verification (U3) inside operator
- Resonance (RA): propagates EPI coherently; phase-aware (U3)
- Coherence (IL): stabilizer enforcing boundedness (U2)
- Dissonance (OZ): controlled destabilizer; must be followed by handlers (U4a)
- Mutation (ZHIR): transformer at threshold; requires recent OZ and
    prior IL (U4b)
- SelfOrganization (THOL): creates sub-EPIs; stabilizer and
    transformer (U2, U4)
- Silence (SHA): closure/observation window (U1b)

Telemetry (read-only):
- |∇φ|: phase gradient; early stress indicator (threshold ≈ 0.38)
- K_φ: phase curvature (part of unified Ψ); confinement hotspots (|K_φ| ≥ 2.8274)
- Φ_s: structural potential; mean absolute drift as passive safety (ΔΦ_s < π/2)

Contracts (summary):
- EM-like: [UM → RA → IL]. Preserve identity; phase-verified coupling (U3).
- Weak-like: [IL? → OZ → ZHIR → IL]. U4b-compliant (prior IL + recent OZ).
- Strong-like: [UM → IL → THOL]. Curvature-driven confinement;
    post-coupling IL.
- Gravity-like: [IL → SHA?]. Telemetry-oriented stabilization (Φ_s drift only).

Usage pattern
-------------
Given a graph G with phase (``theta``/``phase``) and ΔNFR
(``delta_nfr``/``dnfr``) attributes set (e.g., via
``tnfr.physics.patterns``), call one of the helpers with an iterable of
nodes. Results contain operator names applied and key telemetry means
before/after, plus optional warnings when thresholds are exceeded.

Notes
-----
- English-only documentation for canonicity and single
    source-of-truth alignment.
- Extend carefully with physics-first justification and tests. Keep parameters
    minimal and respect U-rules and structural invariants at all times.
"""

from __future__ import annotations

from dataclasses import dataclass
from typing import Any, Iterable

from ..mathematics.unified_numerical import np

try:
    import networkx as nx  # type: ignore
except Exception:  # pragma: no cover
    nx = None  # type: ignore

from ..constants.canonical import U6_STRUCTURAL_POTENTIAL_LIMIT
from ..constants.canonical import (
    PHYSICS_CURVATURE_HOTSPOT_CANONICAL,
    PHYSICS_GRAD_THRESHOLD_CANONICAL,
    PHYSICS_HOTSPOT_FRACTION_CANONICAL,
)
from ..operators.definitions import (
    Coherence,
    Coupling,
    Dissonance,
    Mutation,
    Resonance,
    SelfOrganization,
    Silence,
)
from .fields import (
    compute_phase_curvature,
    compute_phase_gradient,
    compute_structural_potential,
)


@dataclass
class InteractionResult:
    applied: list[str]
    warnings: list[str]
    grad_before_mean: float | None = None
    grad_after_mean: float | None = None
    kphi_before_abs_mean: float | None = None
    kphi_after_abs_mean: float | None = None
    phi_s_drift_mean: float | None = None


def _mean(d: dict[Any, float]) -> float:
    return float(np.mean(list(d.values()))) if d else 0.0


def _apply_to_nodes(G: Any, nodes: Iterable[Any], ops: Iterable[Any]) -> list[str]:
    """Apply operator instances to each node in order; return names applied."""
    applied: list[str] = []
    for node in nodes:
        for op in ops:
            op(G, node)
            applied.append(op.name)
    return applied


def _telemetry_before_after(G: Any, *, compute_phi_s: bool = False) -> dict:
    grad_b = compute_phase_gradient(G)
    kphi_b = compute_phase_curvature(G)
    phi_b = compute_structural_potential(G) if compute_phi_s else None
    return {
        "grad_b": grad_b,
        "kphi_b": kphi_b,
        "phi_b": phi_b,
    }


def _telemetry_after(G: Any, snap: dict, *, compute_phi_s: bool = False) -> dict:
    grad_a = compute_phase_gradient(G)
    kphi_a = compute_phase_curvature(G)
    phi_a = compute_structural_potential(G) if compute_phi_s else None
    drift = None
    if compute_phi_s and snap.get("phi_b") is not None and phi_a is not None:
        b = snap["phi_b"]
        # Mean absolute drift across nodes present in both
        keys = list({*b.keys(), *phi_a.keys()})
        if keys:
            diffs = [abs(phi_a.get(k, 0.0) - b.get(k, 0.0)) for k in keys]
            drift = float(np.mean(diffs))
    return {
        "grad_a": grad_a,
        "kphi_a": kphi_a,
        "phi_a": phi_a,
        "phi_drift": drift,
    }


def em_like(
    G: Any,
    nodes: Iterable[Any],
    *,
    compute_phi_s: bool = False,
    grad_threshold: float = PHYSICS_GRAD_THRESHOLD_CANONICAL,
) -> InteractionResult:
    """EM-like sequence: [Coupling → Resonance → Coherence].

    Purpose
    -------
    Reinforce/coherently propagate existing patterns under phase-compatible
    coupling, then stabilize. Identity-preserving and phase-aware.

    Contracts
    ---------
    - U3: Coupling/Resonance require phase compatibility (verified internally).
    - U2: Coherence stabilizes to maintain boundedness.
    - Read-only telemetry: |∇φ|, K_φ, optional Φ_s drift.

    Parameters
    ----------
    G : Any
        NetworkX-like graph with node attributes ``theta``/``phase`` and
        ``delta_nfr``/``dnfr``.
    nodes : Iterable
        Nodes to which the operator sequence will be applied.
    compute_phi_s : bool, default False
        If True, compute Φ_s before/after and report mean drift.
    grad_threshold : float, default PHYSICS_GRAD_THRESHOLD_CANONICAL
        Heuristic early-warning threshold for mean |∇φ| (≈ 0.196, π/16;
        calibrated, audit 2026: NOT a derived bound — the kinematic bound is
        |∇φ| ≤ π and the sync-onset is σ-dependent ≈ 0.29).

    Returns
    -------
    InteractionResult
        Names of operators applied, warnings, and telemetry means.
    """
    snap = _telemetry_before_after(G, compute_phi_s=compute_phi_s)

    ops = [Coupling(), Resonance(), Coherence()]
    applied = _apply_to_nodes(G, nodes, ops)

    aft = _telemetry_after(G, snap, compute_phi_s=compute_phi_s)
    grad_mean_b = _mean(snap["grad_b"])  # type: ignore[index]
    grad_mean_a = _mean(aft["grad_a"])  # type: ignore[index]
    kphi_abs_b = _mean(
        {k: abs(v) for k, v in snap["kphi_b"].items()}
    )  # type: ignore[index]
    kphi_abs_a = _mean(
        {k: abs(v) for k, v in aft["kphi_a"].items()}
    )  # type: ignore[index]

    warnings: list[str] = []
    if grad_mean_a >= grad_threshold:
        warnings.append(
            (
                "phase gradient high after EM-like: "
                f"{grad_mean_a:.3f} ≥ {grad_threshold}"
            )
        )
    if aft.get("phi_drift") is not None and float(aft["phi_drift"]) >= U6_STRUCTURAL_POTENTIAL_LIMIT:
        warnings.append(
            (
                "structural potential drift exceeded threshold: "
                f"{float(aft['phi_drift']):.3f} ≥ {U6_STRUCTURAL_POTENTIAL_LIMIT:.3f}"
            )
        )

    return InteractionResult(
        applied=applied,
        warnings=warnings,
        grad_before_mean=grad_mean_b,
        grad_after_mean=grad_mean_a,
        kphi_before_abs_mean=kphi_abs_b,
        kphi_after_abs_mean=kphi_abs_a,
        phi_s_drift_mean=(
            float(aft["phi_drift"]) if aft.get("phi_drift") is not None else None
        ),
    )


def weak_like(
    G: Any,
    nodes: Iterable[Any],
    *,
    compute_phi_s: bool = False,
    ensure_stable_base: bool = True,
    grad_threshold: float = PHYSICS_GRAD_THRESHOLD_CANONICAL,
) -> InteractionResult:
    """Weak-like sequence: [IL (optional) → Dissonance → Mutation → Coherence].

    Purpose
    -------
    Trigger controlled qualitative transformations (ZHIR) with stabilized
    pre/post conditions.

    Contracts
    ---------
    - U4b: Mutation (ZHIR) requires a stable base (prior IL) and recent
      destabilizer (OZ) within ~3 operations.
    - U2: Final Coherence to contain elevated ΔNFR.
    - Read-only telemetry: |∇φ|, K_φ, optional Φ_s drift.

    Parameters
    ----------
    ensure_stable_base : bool, default True
        Insert IL before OZ→ZHIR to satisfy U4b stable base requirement.
    grad_threshold : float, default PHYSICS_GRAD_THRESHOLD_CANONICAL
        Heuristic early-warning threshold for mean |∇φ| (≈ 0.196, π/16;
        calibrated, audit 2026: NOT a derived bound — the kinematic bound is
        |∇φ| ≤ π and the sync-onset is σ-dependent ≈ 0.29).

    Returns
    -------
    InteractionResult
        Names of operators applied, warnings, and telemetry means.
    """
    snap = _telemetry_before_after(G, compute_phi_s=compute_phi_s)

    ops: list[Any] = []
    if ensure_stable_base:
        ops.append(Coherence())
    ops.extend([Dissonance(), Mutation(), Coherence()])
    applied = _apply_to_nodes(G, nodes, ops)

    aft = _telemetry_after(G, snap, compute_phi_s=compute_phi_s)
    grad_mean_b = _mean(snap["grad_b"])  # type: ignore[index]
    grad_mean_a = _mean(aft["grad_a"])  # type: ignore[index]
    kphi_abs_b = _mean(
        {k: abs(v) for k, v in snap["kphi_b"].items()}
    )  # type: ignore[index]
    kphi_abs_a = _mean(
        {k: abs(v) for k, v in aft["kphi_a"].items()}
    )  # type: ignore[index]

    warnings: list[str] = []
    if grad_mean_a >= grad_threshold:
        warnings.append(
            (
                "phase gradient high after Weak-like: "
                f"{grad_mean_a:.3f} ≥ {grad_threshold}"
            )
        )
    if aft.get("phi_drift") is not None and float(aft["phi_drift"]) >= U6_STRUCTURAL_POTENTIAL_LIMIT:
        warnings.append(
            (
                "structural potential drift exceeded threshold: "
                f"{float(aft['phi_drift']):.3f} ≥ {U6_STRUCTURAL_POTENTIAL_LIMIT:.3f}"
            )
        )

    return InteractionResult(
        applied=applied,
        warnings=warnings,
        grad_before_mean=grad_mean_b,
        grad_after_mean=grad_mean_a,
        kphi_before_abs_mean=kphi_abs_b,
        kphi_after_abs_mean=kphi_abs_a,
        phi_s_drift_mean=(
            float(aft["phi_drift"]) if aft.get("phi_drift") is not None else None
        ),
    )


def strong_like(
    G: Any,
    nodes: Iterable[Any],
    *,
    compute_phi_s: bool = False,
    curvature_hotspot_threshold: float = PHYSICS_CURVATURE_HOTSPOT_CANONICAL,
) -> InteractionResult:
    """Strong-like sequence: [Coupling → Coherence → SelfOrganization].

    Purpose
    -------
    Promote local confinement and sub-EPI formation in regions of high
    curvature, with stabilization immediately after coupling.

    Contracts
    ---------
    - U3: Coupling remains phase-aware.
    - U2: Coherence right after coupling (boundedness).
    - U5: SelfOrganization creates sub-EPIs while preserving parent coherence.
    - Telemetry: flags |K_φ| hotspots; optional Φ_s drift.

    Parameters
    ----------
    curvature_hotspot_threshold : float, default PHYSICS_CURVATURE_HOTSPOT_CANONICAL
        Canonical |K_φ| threshold for hotspot flagging (0.9×π ≈ 2.8274).

    Returns
    -------
    InteractionResult
        Names of operators applied, warnings, and telemetry means.
    """
    snap = _telemetry_before_after(G, compute_phi_s=compute_phi_s)

    ops = [Coupling(), Coherence(), SelfOrganization()]
    applied = _apply_to_nodes(G, nodes, ops)

    aft = _telemetry_after(G, snap, compute_phi_s=compute_phi_s)
    kphi_abs_a = {k: abs(v) for k, v in aft["kphi_a"].items()}  # type: ignore[index]
    hotspot_frac = 0.0
    if kphi_abs_a:
        vals = list(kphi_abs_a.values())
        hotspot_frac = float(
            sum(v >= curvature_hotspot_threshold for v in vals) / len(vals)
        )

    warnings: list[str] = []
    if hotspot_frac > PHYSICS_HOTSPOT_FRACTION_CANONICAL:  # heuristic
        warnings.append(
            (
                "curvature hotspots after Strong-like: "
                f"{hotspot_frac * 100:.1f}% ≥ {PHYSICS_HOTSPOT_FRACTION_CANONICAL * 100:.1f}%"
            )
        )
    if aft.get("phi_drift") is not None and float(aft["phi_drift"]) >= U6_STRUCTURAL_POTENTIAL_LIMIT:
        warnings.append(
            (
                "structural potential drift exceeded threshold: "
                f"{float(aft['phi_drift']):.3f} ≥ {U6_STRUCTURAL_POTENTIAL_LIMIT:.3f}"
            )
        )

    return InteractionResult(
        applied=applied,
        warnings=warnings,
        grad_before_mean=_mean(snap["grad_b"]),  # type: ignore[index]
        grad_after_mean=_mean(aft["grad_a"]),  # type: ignore[index]
        kphi_before_abs_mean=_mean(
            {k: abs(v) for k, v in snap["kphi_b"].items()}
        ),  # type: ignore[index]
        kphi_after_abs_mean=_mean(kphi_abs_a),
        phi_s_drift_mean=(
            float(aft["phi_drift"]) if aft.get("phi_drift") is not None else None
        ),
    )


def gravity_like(
    G: Any,
    nodes: Iterable[Any],
    *,
    compute_phi_s: bool = True,
    quiet: bool = True,
) -> InteractionResult:
    """Gravity-like: telemetry-oriented stabilization [Coherence → Silence].

    Purpose
    -------
    Stabilize and observe while interpreting Φ_s drift as passive confinement
    (no explicit attraction operator).

    Contracts
    ---------
    - U1b: Silence serves as closure/observation window when ``quiet=True``.
    - U2: Coherence preserves boundedness.
    - Telemetry: Φ_s drift is read-only and used as safety signal.

    Parameters
    ----------
    compute_phi_s : bool, default True
        Compute Φ_s before/after and report mean absolute drift.
    quiet : bool, default True
        Append Silence after Coherence for an observation window.

    Returns
    -------
    InteractionResult
        Names of operators applied, warnings, and telemetry means.
    """
    snap = _telemetry_before_after(G, compute_phi_s=compute_phi_s)

    ops: list[Any] = [Coherence()]
    if quiet:
        ops.append(Silence())
    applied = _apply_to_nodes(G, nodes, ops)

    aft = _telemetry_after(G, snap, compute_phi_s=compute_phi_s)
    warnings: list[str] = []
    if aft.get("phi_drift") is not None and float(aft["phi_drift"]) >= U6_STRUCTURAL_POTENTIAL_LIMIT:
        warnings.append(
            (
                "structural potential drift exceeded threshold: "
                f"{float(aft['phi_drift']):.3f} ≥ {U6_STRUCTURAL_POTENTIAL_LIMIT:.3f}"
            )
        )

    return InteractionResult(
        applied=applied,
        warnings=warnings,
        grad_before_mean=_mean(snap["grad_b"]),  # type: ignore[index]
        grad_after_mean=_mean(aft["grad_a"]),  # type: ignore[index]
        kphi_before_abs_mean=_mean(
            {k: abs(v) for k, v in snap["kphi_b"].items()}
        ),  # type: ignore[index]
        kphi_after_abs_mean=_mean(
            {k: abs(v) for k, v in aft["kphi_a"].items()}
        ),  # type: ignore[index]
        phi_s_drift_mean=(
            float(aft["phi_drift"]) if aft.get("phi_drift") is not None else None
        ),
    )


__all__ = [
    "InteractionResult",
    "em_like",
    "weak_like",
    "strong_like",
    "gravity_like",
]