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Resonant Fractal Nature Theory — a mathematical framework for coherent patterns on graph-coupled networks.

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© 2026 TNFR project — MIT licensed.DOI 10.5281/zenodo.17602860
docs
grammar
PHYSICS_VERIFICATION.md
API_CONTRACTS.mdCANONICAL_OZ_SEQUENCES.mdEMPIRICAL_CONFRONTATION_EEG.mdREADME.mdSTRUCTURAL_FIELDS_TETRAD.mdSTRUCTURAL_INTERFACE_THEORY.md
theory
APPLIED_STRUCTURAL_ANALYSIS.mdCATALOG_TYPE_HYGIENE_PROGRAMME.mdDISSIPATIVE_AND_OPEN_SYSTEMS.mdEMERGENT_ONTOLOGY.mdEXTENDED_FIELDS_AND_DERIVED_QUANTITIES.mdFUNDAMENTAL_THEORY.mdGAUGE_SYMMETRY_AND_UNIFICATION.mdGLOSSARY.mdMATHEMATICAL_DYNAMICS_BASIS.mdMINIMAL_STRUCTURAL_DEGREES.mdNUCLEUS_A_PRIME_LADDER_ATLAS.mdNUCLEUS_B_EQUIVARIANCE_OBSTRUCTIONS.mdPHYSICAL_REGIME_CORRESPONDENCES.mdREADME.mdREMESH_INFINITY_DERIVATION.mdSTRUCTURAL_CONSERVATION_THEOREM.mdSTRUCTURAL_OPERATORS.mdSTRUCTURAL_STABILITY_AND_DYNAMICS.mdTNFR_BSD_RESEARCH_NOTES.mdTNFR_HODGE_RESEARCH_NOTES.mdTNFR_NAVIER_STOKES_RESEARCH_NOTES.mdTNFR_NUMBER_THEORY.mdTNFR_P_VS_NP_RESEARCH_NOTES.mdTNFR_RIEMANN_RESEARCH_NOTES.mdTNFR_VARIATIONAL_PRINCIPLE.mdTNFR_YANG_MILLS_RESEARCH_NOTES.mdTNFR.pdfUNIFIED_GRAMMAR_RULES.md
factorization-lab
analysis
analyze_patterns.pycertificate_manifest.py
benchmarks
benchmark_analysis.pybenchmark_expansion_suite.pyfull_spectrum_factorization.pypaley_gap_extended.pypaley_gap_smoke.pytest_benchmark_suite.py
demos
experiment_contexts
exp_0b1663cd19b7.jsonexp_0bf0054b7474.jsonexp_75a4c8ca616a.jsonexp_848ee0fd1857.jsonexp_f6fe00562193.jsonexp_fdf3da424e1e.json
failure_telemetry_batch.pyfeedback_integration_demo.pyintegration_demo_snapshots.dbseed_management_integration_demo.pysnapshot_integration_demo.pytrajectory_143.jsontrajectory_77.jsontrajectory_89.jsontrajectory_91.jsontrajectory_97.json
docs
FACTORING_PLAYBOOK.mdFALSE_POSITIVE_TEST_SUITE.mdOPERATOR_CERTIFICATES.mdROADMAP.mdSPECTRAL_ROUTE.md
experiment_contexts
exp_cebe1d9e7d8e.json
notebooks
spectral_history.ipynb
scripts
run_false_positive_tests.py
tests
run_false_positive_test_suite.pytest_cli.pytest_false_positive_methodology.pytest_false_positive_verifier.pytest_feedback_integration.pytest_partitioning.pytest_seed_management.pytest_self_opt_support.pytest_snapshot_system.pytest_spectral_paley.pytest_verification_robustness.py
tnfr_factorization
__init__.pyapi.pycli.pyfailure_telemetry.pyfeedback_adapter.pyfeedback_integration.pypartitioning.pyself_opt_support.pyspectral_paley.py
demo_snapshots.dbLICENSE_SNAPSHOT.mdPACKAGE_SUMMARY.mdREADME.mdseed_management.pysnapshot_system.pytest_certificate_hashing.pytest_installation.pyverification_trajectory_77.json
benchmarks
analyze_tetrad_universality.pyb0star_alpha_canonical_product_graphs.pybenchmark_optimization_tracks.pybenchmark_utils.pyboundary_vibration.pybridge_primes_riemann.pychiral_involution.pycli_utils.pycoherence_projector_sense_index.pycommutant_bridge.pycomposition_arithmetic.pyconfinement_zones_test.pyconservation_law_validation.pydirected_paley_bridge.pyemergent_arithmetic_pulse.pyemergent_atom_dynamics.pyemergent_atomic_shells.pyemergent_base_dimension.pyemergent_dimension_dynamics.pyemergent_fractal_pulse.pyemergent_fractal_simplex_dimension.pyemergent_integers_symmetry.pyemergent_musical_nfr.pyemergent_nfr_geometry.pyemergent_nfr_where.pyemergent_rationals.pyemergent_rhythm.pyemergent_screening.pyemergent_shell_cardinals.pyemergent_shell_ordering.pyemergent_simplex_dimension.pyemergent_substrate_symmetry.pyequivariance_wall.pyexternal_phase_gate_validation.pyfield_methods_battery.pygolden_residue_remesh_bridge.pyintegrated_force_regime_study.pyinverse_spectrum_to_symmetry.pyk_phi_safety_demo.pykuramoto_farey_bridge.pymissing_piece_bridge.pymultichannel_interface_benchmark.pynavier_stokes_recipe_bridge.pynodal_propagator_residue_bridge.pyns_moment_hierarchy_cascade.pyoperational_irreducibility.pypaley_bridge.pyphase_curvature_investigation.pyphase_wall.pyphi_s_confinement_investigation.pyprimes_as_consequence.pypulse_phase_coherence_budget.pyREADME.mdremesh_infinity_riemann_baseline.pyremesh_infinity_riemann_composed.pyremesh_infinity_riemann_modified_graph.pyremesh_infinity_riemann_operator.pyremesh_infinity_riemann_spectral_basis.pyremesh_infinity_riemann_spectral_robustness.pyremesh_infinity_riemann_spectral.pyresidue_phase_vs_riemann.pystructural_interface_benchmark.pytemporal_interface_benchmark.pytetrad_results_aggregate.pyu2_destabilization_irreversibility.pyuniversality_clusters.pyxi_c_fast_experiment.py
primality-test
benchmarks
comprehensive_benchmark.py
docs
ADVANCED_INTEGRATION.mdmathematical_foundation.mdperformance_analysis.md
examples
advanced_examples.pybasic_usage.py
tnfr_primality
__init__.py__main__.pyadvanced_cli.pyadvanced_core.pycli.pyconstants.pycore.pyoptimized.py
MANIFEST.inPACKAGE_SUMMARY.mdREADME.mdRELEASE_NOTES_v1.0.mdsetup.pytest_installation.py
tests
core_physics
__init__.pytest_conservation_laws.pytest_delta_nfr_computation_paths.pytest_delta_nfr.pytest_dispersion_coherence_sign_invariance.pytest_emergent_constants_guard.pytest_lyapunov_operators.pytest_nodal_equation.pytest_structural_triad.py
data
replay_manifests
sample_run
_manifest_summary.json_manifest.json_partition_files.txt.gz
self_opt_validation
seed_alpha
paley.json
seed_beta
integration.json
seed_gamma
unknown.json
self_optimization
test_run
partitioned
test_run
test_run_p0.jsontest_run_p1.json
_manifest_summary.json_manifest.json
engines
test_pattern_discovery_manifest.pytest_self_optimization_engine.py
mathematics
__init__.pytest_autodiff.pytest_backends.pytest_dissipative_dynamics.pytest_epi.pytest_factory_patterns.pytest_metrics.pytest_navier_stokes_refounded.pytest_number_theory_canonical.pytest_operators.pytest_residue_networks.pytest_riemann_nodal_pulse.pytest_riemann_pulse_coherence.pytest_spaces.pytest_transforms.pytest_validator.py
operators
test_canonical_operators_modern.pytest_grammar_canon.pytest_grammar_canonical_consistency.pytest_grammar_dynamics.pytest_operator_contracts.pytest_operator_strategies.py
parallel
test_fractal_partition_manifest.py
physics
test_conservation_gauge_unification.pytest_dissipative_conservation.pytest_emergent_chemistry.pytest_field_cache_invalidation.pytest_gauge.pytest_phase_transition.pytest_signatures.pytest_spectral_conservation.pytest_structural_diffusion.pytest_structural_integrity.pytest_symplectic_substrate.pytest_tetrad_bounds.pytest_variational.pytest_yang_mills_closure.pytest_yang_mills_derivability.pytest_yang_mills_scaling.pytest_yang_mills_structural_gap.pytest_yang_mills_u6_sweep.py
scripts
test_run_self_opt_validation.pytest_run_self_optimization.py
sdk
__init__.pytest_simple_advanced.py
__init__.pyconftest.pyREADME.mdtest_breast_cancer_phase_gate_demo.pytest_classical_mechanics.pytest_distributed_fft.pytest_external_phase_gate_validation.pytest_factorization_entrypoint.pytest_multichannel_interface.pytest_nodal_optimizer.pytest_phase_gate_api.pytest_replay_register_manifest.pytest_signal_confrontation.pytest_structural_interface_api.pytest_structural_interface_baselines.pytest_structural_interface_benchmark.pytest_temporal_interface.pytest_vectorized_coherence_length_regression.pytest_wine_quality_phase_gate_demo.pyutils.py
examples
01_foundations
01_hello_world.py02_musical_resonance.py03_network_formation.py04_operator_sequences.py05_coherence_evolution.py06_network_topologies.py07_phase_transitions.py08_emergent_phenomena.py09_visualization_suite.py10_simplified_sdk_showcase.py
02_physics_regimes
11_classical_limit_comparison.py115_operator_contract_audit.py12_classical_mechanics_demo.py13_quantum_mechanics_demo.py14_uncertainty_and_interference.py15_train_crossing_demo.py17_conservation_law_demo.py26_gauge_structure_demo.py27_variational_principle_demo.py28_dissipative_systems_demo.py29_lyapunov_stability_demo.py30_self_optimization_demo.py31_mathematical_constants_basis.py33_complex_field_unification.py34_conservation_protocol_suite.py35_tetrad_irreducibility.py36_grammar_violation_detector.py37_operator_tetrad_synergy.py38_grammar_energy_landscape.py39_nodal_equation_decomposition.py
03_riemann_zeta
157_nodal_pulse_phase_attack.py41_von_mangoldt_zeta_demo.py42_riemann_zeros_as_resonances.py43_prime_ladder_hamiltonian_demo.py44_weil_explicit_formula_demo.py45_li_keiper_demo.py46_weil_tnfr_positivity_demo.py47_alpha_sweep_demo.py48_admissible_family_sweep_demo.py49_nodeaware_gauge_sweep_demo.py50_uniform_coercivity_demo.py51_adaptive_coercivity_demo.py52_paley_gap_coercivity_demo.py53_lyapunov_spectral_positivity_demo.py54_hilbert_polya_demo.py55_structural_zero_density_demo.py56_spectral_emergence_demo.py57_admissible_rescaling_demo.py58_oscillatory_correction_demo.py
04_riemann_L_twisted
59_dirichlet_l_function_demo.py60_dirichlet_l_continuation_demo.py61_dirichlet_l_hamiltonian_demo.py62_dirichlet_weil_explicit_formula_demo.py63_dirichlet_li_keiper_demo.py64_twisted_weil_positivity_demo.py65_twisted_alpha_sweep_demo.py66_twisted_admissible_family_sweep_demo.py67_twisted_nodeaware_gauge_sweep_demo.py68_twisted_hermite_family_demo.py69_twisted_coercivity_uniform_demo.py70_twisted_paley_gap_coercivity_demo.py71_twisted_lyapunov_spectral_demo.py72_twisted_hilbert_polya_demo.py73_twisted_structural_zero_density_demo.py74_twisted_spectral_emergence_demo.py75_twisted_admissible_rescaling_demo.py76_twisted_oscillatory_correction_demo.py
05_type_hygiene
77_remesh_infinity_residue_split_demo.py78_nuf_type_signature_demo.py79_epi_type_signature_demo.py80_phi_type_signature_demo.py81_dnfr_type_signature_demo.py82_remesh_window_type_signature_demo.py83_delta_phi_max_type_signature_demo.py84_coupling_weights_type_signature_demo.py85_tetrad_closure_signature_demo.py86_currents_closure_signature_demo.py87_aggregates_closure_signature_demo.py88_urules_consistency_signature_demo.py89_operator_catalog_discipline_signature_demo.py
06_navier_stokes
158_navier_stokes_two_face_refounded.py
07_number_theory
100_prime_families_orbits.py101_numbers_as_coupled_network.py102_nodal_flow_primes_equilibria.py116_nuf_emergent_prime_visibility.py146_primality_grammatical_inertness.py147_numbers_as_free_monoid_words.py148_capacity_arm_carries_von_mangoldt.py149_p14_is_the_capacity_arm_operator.py153_structural_frequency_rank_cyclotomy.py40_arithmetic_number_theory.py94_generative_number_construction.py95_primes_from_spectral_waves.py96_spectral_vibration_of_coherence.py97_goldbach_additive_multiplicative.pyemergent_chemistry_particles_demo.py
08_emergent_geometry
103_emergent_substrate_meets_riemann.py106_per_node_polarization_geometry.py107_orthogonal_structure_emergent_geometry.py108_emergent_field_generating_structure.py112_structure_predicts_coherence_flow.py113_overdamped_projection_bridge.py114_substrate_conserved_quantities.py117_emergent_geometry_residue_graph.py118_emergent_vs_classical_operator.py119_phase_sector_directed_residue.py120_symmetry_wall_substrate_vs_spectrum.py121_canonical_symmetry_break_negative.py122_factorization_phase_sector.py123_symmetry_sector_decomposition.py124_emergent_metric_fractal_consistency.py125_node_is_the_emergent_substrate.py126_two_layers_base_fiber.py127_base_is_emergent_not_imposed.py128_base_substrate_coemergence.py129_spectral_gap_base_fiber_clock.py130_operators_break_substrate_charges.py131_coemergent_loop_convergence.py132_geometric_phase_holonomy.py133_psi_topological_defects.py134_spectral_dimension_heat_kernel.py135_arrow_of_time_h_theorem.py136_heat_kernel_coefficients.py137_synchronization_transition.py138_structure_frequency_synchronization.py139_grammar_formal_language.py140_grammar_automaton.py141_grammar_rule_decomposition.py142_grammar_operator_quotient.py143_glyphic_function_sublanguage.py144_branching_combinator.py145_syntactic_monoid_starfree.py150_emergent_grammatical_pattern_parry.py151_grammar_in_emergent_geometry.py152_operator_contract_tetrahedron.py154_conductor_annotated_qr_spectrum.py155_ontological_position_of_numbers.py156_emergence_directness_law.py98_emergent_symplectic_substrate.py99_structural_diffusion.pyunified_fields_showcase.py
09_millennium
109_p_vs_np_coherence_synthesis.py110_bsd_rank_structural_pressure.py111_hodge_discrete_and_honest_gap.py
10_applications
159_empirical_confrontation_pipeline.py90_phase_gate_monitor_demo.py91_breast_cancer_phase_gate_demo.py92_wine_quality_phase_gate_demo.py93_structural_interface_demo.pypytorch_cuda_demo.py
README.md
scripts
replay
__init__.pyregister_manifest.py
__init__.pyREADME.mdrebuild_failure_manifest.pyrun_reproducible_benchmarks.pyrun_self_opt_validation.pyrun_self_optimization.pytnfr_is_prime.pyvalidate_conservation_law.pyverify_internal_references.py
src
core
__init__.pyevaluation.py
tnfr
backends
__init__.pyjax_backend.pynumpy_backend.pyoptimized_numpy.pyREADME.mdtorch_backend.py
cli
__init__.py__init__.pyiarguments.pyarguments.pyiexecution.pyexecution.pyiinteractive_validator.pyREADME.mdutils.pyutils.pyi
compat
__init__.pydataclass.pyjsonschema_stub.pymatplotlib_stub.pynumpy_stub.pyREADME.md
config
__init__.py__init__.pyiconstants.pyconstants.pyidefaults_core.pydefaults_init.pydefaults_metric.pydefaults.pyfeature_flags.pyfeature_flags.pyiglyph_constants.pyoperator_names.pyoperator_names.pyiphysics_derivation.pyprecision_modes.pypresets.pypresets.pyiREADME.mdsecurity.pythresholds.pytnfr_config.py
constants
__init__.py__init__.pyialiases.pyaliases.pyicanonical.pymetric.pymetric.pyioperational.py
core
__init__.pycontainer.pydefault_implementations.pyexceptions.pyinterfaces.pyREADME.md
dynamics
__init__.py__init__.pyiadaptation.pyadaptation.pyiadaptive_sequences.pyadaptive_sequences.pyiadelic.pyadvanced_cache_optimizer.pyadvanced_fft_arithmetic.pyaliases.pyaliases.pyibifurcation.pycache_aware_fft_engine.pycanonical.pycanonical.pyicomputational_hub.pycoordination.pycoordination.pyidistributed_fft.pydnfr.pydnfr.pyidynamic_limits.pyemergent_centralization.pyemergent_integration_engine.pyfeedback.pyfeedback.pyifft_backend.pyfft_cache_coordinator.pyfft_dispatchers.pyfft_engine.pyfft_workers.pyfused_dnfr.pyhomeostasis.pyhomeostasis.pyiintegrators.pyintegrators.pyilearning.pylearning.pyimetabolism.pymulti_modal_cache.pynbody_tnfr.pynbody.pynodal_optimizer.pyoptimization_orchestrator.pypropagation.pyREADME.mdruntime.pyruntime.pyisampling.pysampling.pyiselectors.pyselectors.pyiself_optimizing_engine.pyspectral_structural_fusion.pystructural_cache.pystructural_clip.pysymplectic.pyunified_backend.pyunified_mathematical_cache_orchestrator.py
engines
computation
__init__.pyfft_engine.pyunified_fft_engine.pyunified_gpu_system.py
constants
__init__.pycanonical.pyoperational.py
integration
__init__.pyemergent_integration.py
pattern_discovery
__init__.pymathematical_patterns.pymulti_modal_cache.py
self_optimization
__init__.pyengine.py
__init__.pyREADME.md
errors
__init__.pycontextual.py
factorization
__init__.py
flatten
README.md
gamma
README.md
glyph_history
README.md
glyph_runtime
README.md
immutable
README.md
initialization
README.md
io
README.md
math
__init__.pyfields_symbolic.pygrammar_validators.pyoptimizer.pyREADME.mdsymbolic.py
mathematics
__init__.pybackend.pybackend.pyidynamics.pydynamics.pyiepi.pyepi.pyigenerators.pygenerators.pyiliouville.pymetrics.pymetrics.pyinumber_theory.pyoperators_factory.pyoperators_factory.pyioperators.pyoperators.pyioptimized_primality.pyprojection.pyprojection.pyiREADME.mdruntime.pyruntime.pyispaces.pyspaces.pyispectral.pytransforms.pytransforms.pyiunified_cache.pyunified_numerical.pyzeta.py
metrics
__init__.py__init__.pyibuffer_cache.pybuffer_cache.pyicache_utils.pycoherence.pycoherence.pyicommon.pycommon.pyicore.pycore.pyidiagnosis.pydiagnosis.pyiemergence.pyexport.pyexport.pyiglyph_timing.pyglyph_timing.pyilearning_metrics.pylearning_metrics.pyilocal_coherence.pyphase_coherence.pyphase_compatibility.pyREADME.mdreporting.pyreporting.pyisense_index.pysense_index.pyitelemetry.pytetrad.pytrig_cache.pytrig_cache.pyitrig.pytrig.pyi
multiscale
__init__.pyhierarchical.pyREADME.md
navier_stokes
__init__.pyconservative_face.pyoperator.py
node
README.md
observers
README.md
operators
network_analysis
__init__.pysource_detection.py
postconditions
__init__.pymutation.py
preconditions
__init__.pycoherence.pydissonance.pyemission.pymutation.pyreception.pyresonance.py
strategies
__init__.pydefaults.pygpu_strategies.pystrategy.py
__init__.py__init__.pyialgebra.pycanonical_patterns.pycascade.pycoherence.pycontraction.pycoupling.pycycle_detection.pydefinitions_base.pydefinitions.pydefinitions.pyidissonance.pyemission.pyexpansion.pygrammar_application.pygrammar_canon.pygrammar_context.pygrammar_core.pygrammar_dynamics.pygrammar_error_factory.pygrammar_memoization.pygrammar_patterns.pygrammar_telemetry.pygrammar_types.pygrammar_u6.pygrammar_validate.pygrammar.pygrammar.pyihamiltonian.pyhealth_analyzer.pyintrospection.pyjitter.pyjitter.pyilifecycle.pymetabolism.pymetrics_basic.pymetrics_core.pymetrics_network.pymetrics_structural.pymetrics_u6.pymetrics.pymutation.pynodal_equation.pyoperator_contracts.pypattern_detection.pypatterns.pyREADME.mdreception.pyrecursivity.pyregistry.pyregistry.pyiremesh.pyremesh.pyiresonance.pyself_organization.pysilence.pystructural_units.pytransition.py
parallel
__init__.pyauto_scaler.pydistributed.pyengine.pymonitoring.pypartitioner.pyREADME.md
performance
guardrails.py
physics
__init__.py_helpers.pycalibration.pycanonical.pycell.pyclassical_mechanics.pyconservation_gauge_unification.pyconservation.pydissipative_conservation.pyemergent_chemistry.pyemergent_particles.pyextended.pyfields.pygauge.pyintegrity.pyinteractions.pylife.pylyapunov.pypatterns.pyphase_transition.pyquantum_mechanics.pyREADME.mdsignatures.pyspectral_conservation.pyspectral_metrics.pystructural_diffusion.pysymplectic_substrate.pytelemetry.pyunified.pyvariational.pyvectorized_ops.py
primality
__init__.py
recipes
__init__.pycookbook.pyREADME.md
riemann
__init__.pyadmissible_family_sweep.pyadmissible_rescaling.pyaggregates_closure_signature.pyalpha_sweep.pyanalytic_continuation_dirichlet.pyanalytic_continuation.pycoercivity_uniform.pycoupling_weights_type_signature.pycurrents_closure_signature.pydelta_phi_max_type_signature.pydirichlet_l.pydnfr_type_signature.pyepi_type_signature.pyhilbert_polya.pyli_keiper.pylyapunov_spectral_positivity.pynodal_pulse.pynodeaware_gauge_sweep.pynuf_type_signature.pyoperator_catalog_discipline_signature.pyoperator.pyoscillatory_correction.pypaley_gap_coercivity.pyphi_type_signature.pyprime_ladder_hamiltonian.pypulse_coherence.pyremesh_infinity_residue_split.pyremesh_window_type_signature.pyspectral_emergence.pystructural_zero_density.pytelemetry.pytetrad_closure_signature.pytwisted_admissible_family_sweep.pytwisted_admissible_rescaling.pytwisted_alpha_sweep.pytwisted_coercivity_uniform.pytwisted_hermite_family.pytwisted_hilbert_polya.pytwisted_li_keiper.pytwisted_lyapunov_spectral_positivity.pytwisted_nodeaware_gauge_sweep.pytwisted_oscillatory_correction.pytwisted_paley_gap_coercivity.pytwisted_prime_ladder_hamiltonian.pytwisted_spectral_emergence.pytwisted_structural_zero_density.pytwisted_weil_explicit_formula.pytwisted_weil_positivity.pyurules_consistency_signature.pyvon_mangoldt.pyweil_explicit_formula.pyweil_positivity.py
schemas
__init__.pygrammar.jsonREADME.md
sdk
__init__.py__init__.pyiadaptive_system.pyadaptive_system.pyibuilders.pybuilders.pyifluent.pyfluent.pyiREADME.mdself_opt.pysimple.pytemplates.pytemplates.pyiutils.py
security
__init__.pycrypto.pydatabase.pyREADME.mdsubprocess.pyvalidation.py
sequencing
__init__.pypatterns.pyREADME.md
services
__init__.pyorchestrator.pyREADME.md
sparse
__init__.pyREADME.mdrepresentations.py
structural
README.md
telemetry
__init__.pycache_metrics.pycache_metrics.pyiconstants.pynu_f.pynu_f.pyiREADME.mdunified_telemetry_system.pyverbosity.pyverbosity.pyi
tools
__init__.pydomain_templates.pyREADME.mdsequence_generator.pytnfr_is_prime_cli_optimized.pytnfr_is_prime_cli.py
topology
__init__.pyasymmetry.pyREADME.md
utils
cache_layers.pycache.pycache.pyicallbacks.pycallbacks.pyichunks.pychunks.pyidata.pydata.pyifast_diameter.pygraph.pygraph.pyiinit.pyinit.pyiio.pyio.pyinumeric.pynumeric.pyiREADME.mdtopology.pyunified_cache.py
validation
__init__.py__init__.pyiaggregator.pybase.pycompatibility.pycompatibility.pyiconfig.pygraph.pygraph.pyihealth.pyinput_validation.pyinterface_baselines.pyinvariants.pymultichannel_interface.pyphase_gate.pyREADME.mdrules.pyrules.pyiruntime.pyruntime.pyisequence_validator.pysignal_confrontation.pysoft_filters.pysoft_filters.pyispectral.pyspectral.pyistructural_interface.pytemporal_interface.pyunified_validation_system.pyvalidator.pywindow.pywindow.pyi
visualization
__init__.pycascade_viz.pyhierarchy.pyREADME.mdsequence_plotter.py
yang_mills
__init__.pyclosure.pyderivability.pyscaling.pystructural_gap.pyu6_sweep.py
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tetrad_evaluator.py
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FILE: src/tnfr/riemann/hilbert_polya.py

hilbert_polya.py

TNFR-Riemann P27: Hilbert-Polya scaffold.

This module constructs the explicit reference Hilbert-Polya operator on a truncated TNFR Hilbert space and certifies its internal consistency with the rest of the TNFR-Riemann stack (P14 prime-ladder Hamiltonian, P15 Weil-Guinand explicit formula).

The reference operator is

text
T_HP = diag(gamma_1, gamma_2, ..., gamma_N)   on  ell^2_N(N)

where gamma_n are the imaginary parts of the non-trivial Riemann zeros rho_n = 1/2 + i gamma_n obtained from mpmath.zetazero. By construction:

  • T_HP is self-adjoint (real diagonal).
  • For s > 0 the shifted resolvent (T_HP^2 + s^2 I)^{-1/2} belongs to Schatten class S_p for every p > 1; its trace and Hilbert-Schmidt norms are computed exactly from the gamma list.
  • The zero-side sum 2 h(gamma_n) of Weil's explicit formula evaluated through T_HP reproduces P15 to machine precision because both sides consume the same gamma data.
  • The spectral gap between spec(T_HP) = {gamma_n} and spec(P14) = {k log p} is quantified by Wasserstein-1 distance on the truncated empirical measures. This number is the operator-level expression of gap G4: the open structural derivation of T_HP from TNFR first principles.

Honest scope (mandatory, see AGENTS.md):

The P27 module does not prove the Riemann Hypothesis. T_HP is populated by inputting the zeros from mpmath; we do not derive them from the nodal equation, conservation, or grammar. What P27 delivers is the explicit operator-level slot into which a Hilbert-Polya-style attack must fit, plus numerical evidence that the TNFR stack is internally compatible with such a slot. The genuinely open piece (gap G4 = RH) is the structural derivation of T_HP from TNFR first principles without reference to the zeros, which the framework here does not provide.

Per AGENTS.md sec. 13.2, G1/G2/G3 are operationally closed by P12-P15 and G5 is superseded. G4 remains the single open gap and P27 does not attack it: it organises the existing ingredients into the canonical HP shape.

Source Code

python
"""TNFR-Riemann P27: Hilbert-Polya scaffold.

This module constructs the explicit reference Hilbert-Polya operator on a
truncated TNFR Hilbert space and certifies its internal consistency with
the rest of the TNFR-Riemann stack (P14 prime-ladder Hamiltonian, P15
Weil-Guinand explicit formula).

The reference operator is

    T_HP = diag(gamma_1, gamma_2, ..., gamma_N)   on  ell^2_N(N)

where ``gamma_n`` are the imaginary parts of the non-trivial Riemann zeros
``rho_n = 1/2 + i gamma_n`` obtained from ``mpmath.zetazero``.  By
construction:

* ``T_HP`` is self-adjoint (real diagonal).
* For ``s > 0`` the shifted resolvent ``(T_HP^2 + s^2 I)^{-1/2}`` belongs
  to Schatten class ``S_p`` for every ``p > 1``; its trace and
  Hilbert-Schmidt norms are computed exactly from the gamma list.
* The zero-side ``sum 2 h(gamma_n)`` of Weil's explicit formula evaluated
  through ``T_HP`` reproduces P15 to machine precision because both sides
  consume the same gamma data.
* The spectral gap between ``spec(T_HP) = {gamma_n}`` and ``spec(P14) =
  {k log p}`` is quantified by Wasserstein-1 distance on the truncated
  empirical measures.  This number is the operator-level expression of
  gap G4: the open structural derivation of T_HP from TNFR first
  principles.

Honest scope (mandatory, see AGENTS.md):

The P27 module does **not** prove the Riemann Hypothesis.  ``T_HP`` is
populated by *inputting* the zeros from mpmath; we do not derive them
from the nodal equation, conservation, or grammar.  What P27 delivers is
the explicit operator-level slot into which a Hilbert-Polya-style attack
must fit, plus numerical evidence that the TNFR stack is internally
compatible with such a slot.  The genuinely open piece (gap G4 = RH) is
the structural derivation of ``T_HP`` from TNFR first principles without
reference to the zeros, which the framework here does not provide.

Per AGENTS.md sec. 13.2, G1/G2/G3 are operationally closed by P12-P15
and G5 is superseded.  G4 remains the single open gap and P27 does not
attack it: it organises the existing ingredients into the canonical HP
shape.
"""

from __future__ import annotations

import math
from dataclasses import dataclass
from typing import Tuple

import numpy as np

from .prime_ladder_hamiltonian import (
    PrimeLadderHamiltonian,
    build_prime_ladder_hamiltonian,
)
from .weil_explicit_formula import (
    GaussianTestFunction,
    gaussian_test_function,
    weil_archimedean_integral,
    weil_pole_side,
    weil_prime_side_from_hamiltonian,
)

__all__ = [
    "HilbertPolyaCertificate",
    "fetch_zero_imaginary_parts",
    "build_hp_operator",
    "verify_hp_self_adjoint",
    "hp_resolvent_schatten_norms",
    "hp_zero_side_from_operator",
    "wasserstein_1_distance",
    "structural_gap_p14_vs_hp",
    "compute_hilbert_polya_certificate",
]


# ----------------------------------------------------------------------
# Atomic primitives
# ----------------------------------------------------------------------


def fetch_zero_imaginary_parts(n_zeros: int, *, dps: int = 30) -> np.ndarray:
    """Return ``[gamma_1, ..., gamma_N]`` from ``mpmath.zetazero``.

    Parameters
    ----------
    n_zeros
        Number of positive-axis non-trivial zeros to fetch.
    dps
        Decimal precision for mpmath.

    Returns
    -------
    np.ndarray
        Array of length ``n_zeros`` with strictly positive entries.
    """
    if n_zeros <= 0:
        raise ValueError("n_zeros must be positive")
    import mpmath

    with mpmath.workdps(dps):
        gammas = np.array(
            [float(mpmath.zetazero(n).imag) for n in range(1, n_zeros + 1)],
            dtype=float,
        )
    if not np.all(gammas > 0):
        raise RuntimeError("mpmath.zetazero returned a non-positive imaginary part")
    return gammas


def build_hp_operator(gammas: np.ndarray) -> np.ndarray:
    """Return the diagonal Hilbert-Polya operator ``T_HP = diag(gammas)``."""
    gammas = np.asarray(gammas, dtype=float)
    if gammas.ndim != 1:
        raise ValueError("gammas must be a 1-D array")
    return np.diag(gammas)


def verify_hp_self_adjoint(T: np.ndarray, *, tol: float = 1e-12) -> dict:
    """Check that ``T`` is self-adjoint within ``tol``."""
    arr = np.asarray(T)
    if arr.ndim != 2 or arr.shape[0] != arr.shape[1]:
        raise ValueError("T must be a square matrix")
    asym = arr - arr.conj().T
    asym_norm = float(np.linalg.norm(asym, ord="fro"))
    imag_norm = float(np.linalg.norm(arr.imag, ord="fro"))
    return {
        "asymmetry_frobenius": asym_norm,
        "imaginary_frobenius": imag_norm,
        "self_adjoint": asym_norm <= tol and imag_norm <= tol,
        "tolerance": tol,
    }


def hp_resolvent_schatten_norms(
    gammas: np.ndarray,
    *,
    shift: float = 1.0,
) -> dict:
    r"""Compute Schatten norms of the shifted resolvent of ``T_HP``.

    Returns the trace norm ``sum 1 / (gamma_n^2 + s^2)``, the
    Hilbert-Schmidt norm ``sqrt(sum 1 / (gamma_n^2 + s^2)^2)``, and the
    operator norm ``1 / sqrt(gamma_min^2 + s^2)``.
    """
    gammas = np.asarray(gammas, dtype=float)
    if shift <= 0.0:
        raise ValueError("shift must be strictly positive")
    denom = gammas**2 + shift**2
    if not np.all(denom > 0):
        raise ValueError("shifted spectrum is degenerate")
    s1 = float(np.sum(1.0 / denom))
    s2 = float(math.sqrt(np.sum(1.0 / denom**2)))
    op_norm = float(1.0 / math.sqrt(np.min(denom)))
    return {
        "shift": float(shift),
        "schatten_1_norm": s1,
        "schatten_2_norm": s2,
        "operator_norm_inverse": op_norm,
        "trace_class": math.isfinite(s1),
    }


def hp_zero_side_from_operator(
    gammas: np.ndarray,
    test: GaussianTestFunction,
) -> float:
    r"""Evaluate ``sum_n 2 h(gamma_n)`` directly from the diagonal of T_HP.

    This is identical to P15's :func:`weil_zero_side` evaluated on the
    same gamma list, but exposes the dependence as an inner product
    ``Tr h(T_HP^2)^{1/2}`` against the spectral measure of ``T_HP``.
    """
    gammas = np.asarray(gammas, dtype=float)
    h_values = np.array([test.h(float(g)) for g in gammas], dtype=float)
    return float(2.0 * np.sum(h_values))


def wasserstein_1_distance(a: np.ndarray, b: np.ndarray) -> float:
    r"""Compute the 1-Wasserstein distance between two 1-D empirical measures.

    Both inputs are interpreted as equally weighted samples; they are
    sorted, padded to common length by interpolating the shorter one's
    quantile function, and the integral ``int_0^1 |F_a^{-1}(u) -
    F_b^{-1}(u)| du`` is approximated by trapezoidal quadrature.
    """
    a_sorted = np.sort(np.asarray(a, dtype=float))
    b_sorted = np.sort(np.asarray(b, dtype=float))
    n = max(len(a_sorted), len(b_sorted))
    if n == 0:
        return 0.0
    u = (np.arange(n) + 0.5) / n
    ua = (np.arange(len(a_sorted)) + 0.5) / len(a_sorted)
    ub = (np.arange(len(b_sorted)) + 0.5) / len(b_sorted)
    qa = np.interp(u, ua, a_sorted)
    qb = np.interp(u, ub, b_sorted)
    return float(np.mean(np.abs(qa - qb)))


def structural_gap_p14_vs_hp(
    bundle: PrimeLadderHamiltonian,
    gammas: np.ndarray,
) -> dict:
    """Quantify the operator-level gap G4 on truncated spectra.

    Compares ``spec(P14) = {k log p}`` (positive eigenvalues only) with
    ``spec(T_HP) = {gamma_n}`` on the same truncation length.  The
    Wasserstein-1 distance is the relevant scalar because both spectra
    are real and unbounded with different growth: P14 grows like
    ``log n`` while T_HP grows like ``2 pi n / log n``.

    The growth-rate mismatch is the operator-level manifestation of the
    open structural derivation problem (gap G4).  No transformation that
    sends one spectrum to the other can be a smooth structural map; any
    Hilbert-Polya-style derivation must therefore introduce a non-linear
    spectral rescaling derived from TNFR first principles.
    """
    p14_eigs, _ = bundle.hamiltonian.get_spectrum()
    p14_eigs = np.sort(np.real(p14_eigs))
    p14_eigs = p14_eigs[p14_eigs > 0.0]
    n_compare = min(len(p14_eigs), len(gammas))
    p14_trunc = p14_eigs[:n_compare]
    hp_trunc = np.sort(np.asarray(gammas, dtype=float))[:n_compare]
    w1 = wasserstein_1_distance(p14_trunc, hp_trunc)
    # Asymptotic growth diagnostic: ratio of last spectral value
    if n_compare > 0:
        growth_ratio = float(hp_trunc[-1] / p14_trunc[-1])
    else:
        growth_ratio = float("nan")
    return {
        "n_compared": int(n_compare),
        "p14_min": float(p14_trunc[0]) if n_compare > 0 else float("nan"),
        "p14_max": float(p14_trunc[-1]) if n_compare > 0 else float("nan"),
        "hp_min": float(hp_trunc[0]) if n_compare > 0 else float("nan"),
        "hp_max": float(hp_trunc[-1]) if n_compare > 0 else float("nan"),
        "wasserstein_1": w1,
        "asymptotic_growth_ratio": growth_ratio,
    }


# ----------------------------------------------------------------------
# Certificate dataclass and orchestrator
# ----------------------------------------------------------------------


@dataclass(frozen=True)
class HilbertPolyaCertificate:
    """Internal-consistency certificate for the TNFR Hilbert-Polya scaffold."""

    # Truncation parameters
    n_zeros: int
    n_primes: int
    max_power: int

    # Self-adjointness
    asymmetry_frobenius: float
    self_adjoint: bool

    # Resolvent
    resolvent_shift: float
    schatten_1_norm: float
    schatten_2_norm: float
    operator_norm_inverse: float
    trace_class: bool

    # Weil-Guinand consistency
    gaussian_sigma: float
    zero_side_via_hp: float
    pole_side: float
    archimedean_side: float
    prime_side_via_p14: float
    rhs_total: float
    residual: float
    relative_residual: float
    weil_tolerance: float
    weil_verified: bool

    # Operator-level gap G4
    spectral_gap_n_compared: int
    spectral_gap_wasserstein_1: float
    spectral_gap_growth_ratio: float

    # Overall verdict
    scaffold_consistent: bool
    notes: Tuple[str, ...]

    def summary(self) -> str:
        return (
            f"HilbertPolyaCertificate("
            f"n_zeros={self.n_zeros}, "
            f"primes={self.n_primes}, "
            f"self_adjoint={self.self_adjoint}, "
            f"trace_class={self.trace_class}, "
            f"||R||_1={self.schatten_1_norm:.4e}, "
            f"weil_residual={self.residual:.3e}, "
            f"W_1(P14,HP)={self.spectral_gap_wasserstein_1:.4e}, "
            f"scaffold_consistent={self.scaffold_consistent})"
        )


def compute_hilbert_polya_certificate(
    *,
    n_primes: int = 50,
    max_power: int = 8,
    n_zeros: int = 80,
    gaussian_sigma: float = 8.0,
    resolvent_shift: float = 1.0,
    weil_tolerance: float = 1e-3,
    dps: int = 30,
) -> HilbertPolyaCertificate:
    """Build T_HP and certify TNFR-stack consistency.

    Parameters
    ----------
    n_primes, max_power
        Prime-ladder bundle dimensions; passed to P14 builder.
    n_zeros
        Length of the gamma list used to populate ``T_HP``.
    gaussian_sigma
        Width of the Gaussian test function used for Weil-Guinand.
    resolvent_shift
        Positive shift ``s`` for ``(T_HP^2 + s^2 I)^{-1/2}``.
    weil_tolerance
        Acceptance tolerance for the Weil-Guinand residual.
    dps
        mpmath decimal precision for zero computation.
    """
    if n_zeros <= 0:
        raise ValueError("n_zeros must be positive")

    bundle = build_prime_ladder_hamiltonian(
        n_primes=n_primes,
        max_power=max_power,
        coupling=0.0,
    )
    gammas = fetch_zero_imaginary_parts(n_zeros, dps=dps)
    T_hp = build_hp_operator(gammas)

    self_adj = verify_hp_self_adjoint(T_hp)
    resolvent = hp_resolvent_schatten_norms(gammas, shift=resolvent_shift)

    test = gaussian_test_function(gaussian_sigma)
    zero_side = hp_zero_side_from_operator(gammas, test)
    pole_side_bare = weil_pole_side(test)
    log_pi_term = -test.g_zero() * math.log(math.pi)
    pole_side = pole_side_bare + log_pi_term
    archimedean = weil_archimedean_integral(test)
    prime_side = weil_prime_side_from_hamiltonian(bundle, test)
    rhs = pole_side + archimedean + prime_side
    residual = abs(zero_side - rhs)
    denom_norm = max(abs(zero_side), abs(rhs), 1.0)
    rel_residual = residual / denom_norm
    weil_ok = residual <= weil_tolerance

    gap = structural_gap_p14_vs_hp(bundle, gammas)

    scaffold_ok = bool(
        self_adj["self_adjoint"] and resolvent["trace_class"] and weil_ok
    )

    notes: Tuple[str, ...] = (
        "T_HP is populated by inputting mpmath.zetazero outputs; the",
        "scaffold does not derive the zeros from TNFR first principles.",
        "spec(P14) grows like log n while spec(T_HP) grows like",
        "2*pi*n/log n; the Wasserstein-1 distance reported below",
        "quantifies gap G4 = the structural derivation of T_HP that",
        "would actually engage the Riemann Hypothesis.",
    )

    return HilbertPolyaCertificate(
        n_zeros=int(n_zeros),
        n_primes=int(n_primes),
        max_power=int(max_power),
        asymmetry_frobenius=self_adj["asymmetry_frobenius"],
        self_adjoint=bool(self_adj["self_adjoint"]),
        resolvent_shift=resolvent["shift"],
        schatten_1_norm=resolvent["schatten_1_norm"],
        schatten_2_norm=resolvent["schatten_2_norm"],
        operator_norm_inverse=resolvent["operator_norm_inverse"],
        trace_class=bool(resolvent["trace_class"]),
        gaussian_sigma=float(gaussian_sigma),
        zero_side_via_hp=float(zero_side),
        pole_side=float(pole_side),
        archimedean_side=float(archimedean),
        prime_side_via_p14=float(prime_side),
        rhs_total=float(rhs),
        residual=float(residual),
        relative_residual=float(rel_residual),
        weil_tolerance=float(weil_tolerance),
        weil_verified=bool(weil_ok),
        spectral_gap_n_compared=int(gap["n_compared"]),
        spectral_gap_wasserstein_1=float(gap["wasserstein_1"]),
        spectral_gap_growth_ratio=float(gap["asymptotic_growth_ratio"]),
        scaffold_consistent=scaffold_ok,
        notes=notes,
    )