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Resonant Fractal Nature Theory — a mathematical framework for coherent patterns on graph-coupled networks.

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© 2026 TNFR project — MIT licensed.DOI 10.5281/zenodo.17602860
docs
grammar
PHYSICS_VERIFICATION.md
API_CONTRACTS.mdCANONICAL_OZ_SEQUENCES.mdEMPIRICAL_CONFRONTATION_EEG.mdREADME.mdSTRUCTURAL_FIELDS_TETRAD.mdSTRUCTURAL_INTERFACE_THEORY.md
theory
APPLIED_STRUCTURAL_ANALYSIS.mdCATALOG_TYPE_HYGIENE_PROGRAMME.mdDISSIPATIVE_AND_OPEN_SYSTEMS.mdEMERGENT_ONTOLOGY.mdEXTENDED_FIELDS_AND_DERIVED_QUANTITIES.mdFUNDAMENTAL_THEORY.mdGAUGE_SYMMETRY_AND_UNIFICATION.mdGLOSSARY.mdMATHEMATICAL_DYNAMICS_BASIS.mdMINIMAL_STRUCTURAL_DEGREES.mdNUCLEUS_A_PRIME_LADDER_ATLAS.mdNUCLEUS_B_EQUIVARIANCE_OBSTRUCTIONS.mdPHYSICAL_REGIME_CORRESPONDENCES.mdREADME.mdREMESH_INFINITY_DERIVATION.mdSTRUCTURAL_CONSERVATION_THEOREM.mdSTRUCTURAL_OPERATORS.mdSTRUCTURAL_STABILITY_AND_DYNAMICS.mdTNFR_BSD_RESEARCH_NOTES.mdTNFR_HODGE_RESEARCH_NOTES.mdTNFR_NAVIER_STOKES_RESEARCH_NOTES.mdTNFR_NUMBER_THEORY.mdTNFR_P_VS_NP_RESEARCH_NOTES.mdTNFR_RIEMANN_RESEARCH_NOTES.mdTNFR_VARIATIONAL_PRINCIPLE.mdTNFR_YANG_MILLS_RESEARCH_NOTES.mdTNFR.pdfUNIFIED_GRAMMAR_RULES.md
factorization-lab
analysis
analyze_patterns.pycertificate_manifest.py
benchmarks
benchmark_analysis.pybenchmark_expansion_suite.pyfull_spectrum_factorization.pypaley_gap_extended.pypaley_gap_smoke.pytest_benchmark_suite.py
demos
experiment_contexts
exp_0b1663cd19b7.jsonexp_0bf0054b7474.jsonexp_75a4c8ca616a.jsonexp_848ee0fd1857.jsonexp_f6fe00562193.jsonexp_fdf3da424e1e.json
failure_telemetry_batch.pyfeedback_integration_demo.pyintegration_demo_snapshots.dbseed_management_integration_demo.pysnapshot_integration_demo.pytrajectory_143.jsontrajectory_77.jsontrajectory_89.jsontrajectory_91.jsontrajectory_97.json
docs
FACTORING_PLAYBOOK.mdFALSE_POSITIVE_TEST_SUITE.mdOPERATOR_CERTIFICATES.mdROADMAP.mdSPECTRAL_ROUTE.md
experiment_contexts
exp_cebe1d9e7d8e.json
notebooks
spectral_history.ipynb
scripts
run_false_positive_tests.py
tests
run_false_positive_test_suite.pytest_cli.pytest_false_positive_methodology.pytest_false_positive_verifier.pytest_feedback_integration.pytest_partitioning.pytest_seed_management.pytest_self_opt_support.pytest_snapshot_system.pytest_spectral_paley.pytest_verification_robustness.py
tnfr_factorization
__init__.pyapi.pycli.pyfailure_telemetry.pyfeedback_adapter.pyfeedback_integration.pypartitioning.pyself_opt_support.pyspectral_paley.py
demo_snapshots.dbLICENSE_SNAPSHOT.mdPACKAGE_SUMMARY.mdREADME.mdseed_management.pysnapshot_system.pytest_certificate_hashing.pytest_installation.pyverification_trajectory_77.json
benchmarks
analyze_tetrad_universality.pyb0star_alpha_canonical_product_graphs.pybenchmark_optimization_tracks.pybenchmark_utils.pyboundary_vibration.pybridge_primes_riemann.pychiral_involution.pycli_utils.pycoherence_projector_sense_index.pycommutant_bridge.pycomposition_arithmetic.pyconfinement_zones_test.pyconservation_law_validation.pydirected_paley_bridge.pyemergent_arithmetic_pulse.pyemergent_atom_dynamics.pyemergent_atomic_shells.pyemergent_base_dimension.pyemergent_dimension_dynamics.pyemergent_fractal_pulse.pyemergent_fractal_simplex_dimension.pyemergent_integers_symmetry.pyemergent_musical_nfr.pyemergent_nfr_geometry.pyemergent_nfr_where.pyemergent_rationals.pyemergent_rhythm.pyemergent_screening.pyemergent_shell_cardinals.pyemergent_shell_ordering.pyemergent_simplex_dimension.pyemergent_substrate_symmetry.pyequivariance_wall.pyexternal_phase_gate_validation.pyfield_methods_battery.pygolden_residue_remesh_bridge.pyintegrated_force_regime_study.pyinverse_spectrum_to_symmetry.pyk_phi_safety_demo.pykuramoto_farey_bridge.pymissing_piece_bridge.pymultichannel_interface_benchmark.pynavier_stokes_recipe_bridge.pynodal_propagator_residue_bridge.pyns_moment_hierarchy_cascade.pyoperational_irreducibility.pypaley_bridge.pyphase_curvature_investigation.pyphase_wall.pyphi_s_confinement_investigation.pyprimes_as_consequence.pypulse_phase_coherence_budget.pyREADME.mdremesh_infinity_riemann_baseline.pyremesh_infinity_riemann_composed.pyremesh_infinity_riemann_modified_graph.pyremesh_infinity_riemann_operator.pyremesh_infinity_riemann_spectral_basis.pyremesh_infinity_riemann_spectral_robustness.pyremesh_infinity_riemann_spectral.pyresidue_phase_vs_riemann.pystructural_interface_benchmark.pytemporal_interface_benchmark.pytetrad_results_aggregate.pyu2_destabilization_irreversibility.pyuniversality_clusters.pyxi_c_fast_experiment.py
primality-test
benchmarks
comprehensive_benchmark.py
docs
ADVANCED_INTEGRATION.mdmathematical_foundation.mdperformance_analysis.md
examples
advanced_examples.pybasic_usage.py
tnfr_primality
__init__.py__main__.pyadvanced_cli.pyadvanced_core.pycli.pyconstants.pycore.pyoptimized.py
MANIFEST.inPACKAGE_SUMMARY.mdREADME.mdRELEASE_NOTES_v1.0.mdsetup.pytest_installation.py
tests
core_physics
__init__.pytest_conservation_laws.pytest_delta_nfr_computation_paths.pytest_delta_nfr.pytest_dispersion_coherence_sign_invariance.pytest_emergent_constants_guard.pytest_lyapunov_operators.pytest_nodal_equation.pytest_structural_triad.py
data
replay_manifests
sample_run
_manifest_summary.json_manifest.json_partition_files.txt.gz
self_opt_validation
seed_alpha
paley.json
seed_beta
integration.json
seed_gamma
unknown.json
self_optimization
test_run
partitioned
test_run
test_run_p0.jsontest_run_p1.json
_manifest_summary.json_manifest.json
engines
test_pattern_discovery_manifest.pytest_self_optimization_engine.py
mathematics
__init__.pytest_autodiff.pytest_backends.pytest_dissipative_dynamics.pytest_epi.pytest_factory_patterns.pytest_metrics.pytest_navier_stokes_refounded.pytest_number_theory_canonical.pytest_operators.pytest_residue_networks.pytest_riemann_nodal_pulse.pytest_riemann_pulse_coherence.pytest_spaces.pytest_transforms.pytest_validator.py
operators
test_canonical_operators_modern.pytest_grammar_canon.pytest_grammar_canonical_consistency.pytest_grammar_dynamics.pytest_operator_contracts.pytest_operator_strategies.py
parallel
test_fractal_partition_manifest.py
physics
test_conservation_gauge_unification.pytest_dissipative_conservation.pytest_emergent_chemistry.pytest_field_cache_invalidation.pytest_gauge.pytest_phase_transition.pytest_signatures.pytest_spectral_conservation.pytest_structural_diffusion.pytest_structural_integrity.pytest_symplectic_substrate.pytest_tetrad_bounds.pytest_variational.pytest_yang_mills_closure.pytest_yang_mills_derivability.pytest_yang_mills_scaling.pytest_yang_mills_structural_gap.pytest_yang_mills_u6_sweep.py
scripts
test_run_self_opt_validation.pytest_run_self_optimization.py
sdk
__init__.pytest_simple_advanced.py
__init__.pyconftest.pyREADME.mdtest_breast_cancer_phase_gate_demo.pytest_classical_mechanics.pytest_distributed_fft.pytest_external_phase_gate_validation.pytest_factorization_entrypoint.pytest_multichannel_interface.pytest_nodal_optimizer.pytest_phase_gate_api.pytest_replay_register_manifest.pytest_signal_confrontation.pytest_structural_interface_api.pytest_structural_interface_baselines.pytest_structural_interface_benchmark.pytest_temporal_interface.pytest_vectorized_coherence_length_regression.pytest_wine_quality_phase_gate_demo.pyutils.py
examples
01_foundations
01_hello_world.py02_musical_resonance.py03_network_formation.py04_operator_sequences.py05_coherence_evolution.py06_network_topologies.py07_phase_transitions.py08_emergent_phenomena.py09_visualization_suite.py10_simplified_sdk_showcase.py
02_physics_regimes
11_classical_limit_comparison.py115_operator_contract_audit.py12_classical_mechanics_demo.py13_quantum_mechanics_demo.py14_uncertainty_and_interference.py15_train_crossing_demo.py17_conservation_law_demo.py26_gauge_structure_demo.py27_variational_principle_demo.py28_dissipative_systems_demo.py29_lyapunov_stability_demo.py30_self_optimization_demo.py31_mathematical_constants_basis.py33_complex_field_unification.py34_conservation_protocol_suite.py35_tetrad_irreducibility.py36_grammar_violation_detector.py37_operator_tetrad_synergy.py38_grammar_energy_landscape.py39_nodal_equation_decomposition.py
03_riemann_zeta
157_nodal_pulse_phase_attack.py41_von_mangoldt_zeta_demo.py42_riemann_zeros_as_resonances.py43_prime_ladder_hamiltonian_demo.py44_weil_explicit_formula_demo.py45_li_keiper_demo.py46_weil_tnfr_positivity_demo.py47_alpha_sweep_demo.py48_admissible_family_sweep_demo.py49_nodeaware_gauge_sweep_demo.py50_uniform_coercivity_demo.py51_adaptive_coercivity_demo.py52_paley_gap_coercivity_demo.py53_lyapunov_spectral_positivity_demo.py54_hilbert_polya_demo.py55_structural_zero_density_demo.py56_spectral_emergence_demo.py57_admissible_rescaling_demo.py58_oscillatory_correction_demo.py
04_riemann_L_twisted
59_dirichlet_l_function_demo.py60_dirichlet_l_continuation_demo.py61_dirichlet_l_hamiltonian_demo.py62_dirichlet_weil_explicit_formula_demo.py63_dirichlet_li_keiper_demo.py64_twisted_weil_positivity_demo.py65_twisted_alpha_sweep_demo.py66_twisted_admissible_family_sweep_demo.py67_twisted_nodeaware_gauge_sweep_demo.py68_twisted_hermite_family_demo.py69_twisted_coercivity_uniform_demo.py70_twisted_paley_gap_coercivity_demo.py71_twisted_lyapunov_spectral_demo.py72_twisted_hilbert_polya_demo.py73_twisted_structural_zero_density_demo.py74_twisted_spectral_emergence_demo.py75_twisted_admissible_rescaling_demo.py76_twisted_oscillatory_correction_demo.py
05_type_hygiene
77_remesh_infinity_residue_split_demo.py78_nuf_type_signature_demo.py79_epi_type_signature_demo.py80_phi_type_signature_demo.py81_dnfr_type_signature_demo.py82_remesh_window_type_signature_demo.py83_delta_phi_max_type_signature_demo.py84_coupling_weights_type_signature_demo.py85_tetrad_closure_signature_demo.py86_currents_closure_signature_demo.py87_aggregates_closure_signature_demo.py88_urules_consistency_signature_demo.py89_operator_catalog_discipline_signature_demo.py
06_navier_stokes
158_navier_stokes_two_face_refounded.py
07_number_theory
100_prime_families_orbits.py101_numbers_as_coupled_network.py102_nodal_flow_primes_equilibria.py116_nuf_emergent_prime_visibility.py146_primality_grammatical_inertness.py147_numbers_as_free_monoid_words.py148_capacity_arm_carries_von_mangoldt.py149_p14_is_the_capacity_arm_operator.py153_structural_frequency_rank_cyclotomy.py40_arithmetic_number_theory.py94_generative_number_construction.py95_primes_from_spectral_waves.py96_spectral_vibration_of_coherence.py97_goldbach_additive_multiplicative.pyemergent_chemistry_particles_demo.py
08_emergent_geometry
103_emergent_substrate_meets_riemann.py106_per_node_polarization_geometry.py107_orthogonal_structure_emergent_geometry.py108_emergent_field_generating_structure.py112_structure_predicts_coherence_flow.py113_overdamped_projection_bridge.py114_substrate_conserved_quantities.py117_emergent_geometry_residue_graph.py118_emergent_vs_classical_operator.py119_phase_sector_directed_residue.py120_symmetry_wall_substrate_vs_spectrum.py121_canonical_symmetry_break_negative.py122_factorization_phase_sector.py123_symmetry_sector_decomposition.py124_emergent_metric_fractal_consistency.py125_node_is_the_emergent_substrate.py126_two_layers_base_fiber.py127_base_is_emergent_not_imposed.py128_base_substrate_coemergence.py129_spectral_gap_base_fiber_clock.py130_operators_break_substrate_charges.py131_coemergent_loop_convergence.py132_geometric_phase_holonomy.py133_psi_topological_defects.py134_spectral_dimension_heat_kernel.py135_arrow_of_time_h_theorem.py136_heat_kernel_coefficients.py137_synchronization_transition.py138_structure_frequency_synchronization.py139_grammar_formal_language.py140_grammar_automaton.py141_grammar_rule_decomposition.py142_grammar_operator_quotient.py143_glyphic_function_sublanguage.py144_branching_combinator.py145_syntactic_monoid_starfree.py150_emergent_grammatical_pattern_parry.py151_grammar_in_emergent_geometry.py152_operator_contract_tetrahedron.py154_conductor_annotated_qr_spectrum.py155_ontological_position_of_numbers.py156_emergence_directness_law.py98_emergent_symplectic_substrate.py99_structural_diffusion.pyunified_fields_showcase.py
09_millennium
109_p_vs_np_coherence_synthesis.py110_bsd_rank_structural_pressure.py111_hodge_discrete_and_honest_gap.py
10_applications
159_empirical_confrontation_pipeline.py90_phase_gate_monitor_demo.py91_breast_cancer_phase_gate_demo.py92_wine_quality_phase_gate_demo.py93_structural_interface_demo.pypytorch_cuda_demo.py
README.md
scripts
replay
__init__.pyregister_manifest.py
__init__.pyREADME.mdrebuild_failure_manifest.pyrun_reproducible_benchmarks.pyrun_self_opt_validation.pyrun_self_optimization.pytnfr_is_prime.pyvalidate_conservation_law.pyverify_internal_references.py
src
core
__init__.pyevaluation.py
tnfr
backends
__init__.pyjax_backend.pynumpy_backend.pyoptimized_numpy.pyREADME.mdtorch_backend.py
cli
__init__.py__init__.pyiarguments.pyarguments.pyiexecution.pyexecution.pyiinteractive_validator.pyREADME.mdutils.pyutils.pyi
compat
__init__.pydataclass.pyjsonschema_stub.pymatplotlib_stub.pynumpy_stub.pyREADME.md
config
__init__.py__init__.pyiconstants.pyconstants.pyidefaults_core.pydefaults_init.pydefaults_metric.pydefaults.pyfeature_flags.pyfeature_flags.pyiglyph_constants.pyoperator_names.pyoperator_names.pyiphysics_derivation.pyprecision_modes.pypresets.pypresets.pyiREADME.mdsecurity.pythresholds.pytnfr_config.py
constants
__init__.py__init__.pyialiases.pyaliases.pyicanonical.pymetric.pymetric.pyioperational.py
core
__init__.pycontainer.pydefault_implementations.pyexceptions.pyinterfaces.pyREADME.md
dynamics
__init__.py__init__.pyiadaptation.pyadaptation.pyiadaptive_sequences.pyadaptive_sequences.pyiadelic.pyadvanced_cache_optimizer.pyadvanced_fft_arithmetic.pyaliases.pyaliases.pyibifurcation.pycache_aware_fft_engine.pycanonical.pycanonical.pyicomputational_hub.pycoordination.pycoordination.pyidistributed_fft.pydnfr.pydnfr.pyidynamic_limits.pyemergent_centralization.pyemergent_integration_engine.pyfeedback.pyfeedback.pyifft_backend.pyfft_cache_coordinator.pyfft_dispatchers.pyfft_engine.pyfft_workers.pyfused_dnfr.pyhomeostasis.pyhomeostasis.pyiintegrators.pyintegrators.pyilearning.pylearning.pyimetabolism.pymulti_modal_cache.pynbody_tnfr.pynbody.pynodal_optimizer.pyoptimization_orchestrator.pypropagation.pyREADME.mdruntime.pyruntime.pyisampling.pysampling.pyiselectors.pyselectors.pyiself_optimizing_engine.pyspectral_structural_fusion.pystructural_cache.pystructural_clip.pysymplectic.pyunified_backend.pyunified_mathematical_cache_orchestrator.py
engines
computation
__init__.pyfft_engine.pyunified_fft_engine.pyunified_gpu_system.py
constants
__init__.pycanonical.pyoperational.py
integration
__init__.pyemergent_integration.py
pattern_discovery
__init__.pymathematical_patterns.pymulti_modal_cache.py
self_optimization
__init__.pyengine.py
__init__.pyREADME.md
errors
__init__.pycontextual.py
factorization
__init__.py
flatten
README.md
gamma
README.md
glyph_history
README.md
glyph_runtime
README.md
immutable
README.md
initialization
README.md
io
README.md
math
__init__.pyfields_symbolic.pygrammar_validators.pyoptimizer.pyREADME.mdsymbolic.py
mathematics
__init__.pybackend.pybackend.pyidynamics.pydynamics.pyiepi.pyepi.pyigenerators.pygenerators.pyiliouville.pymetrics.pymetrics.pyinumber_theory.pyoperators_factory.pyoperators_factory.pyioperators.pyoperators.pyioptimized_primality.pyprojection.pyprojection.pyiREADME.mdruntime.pyruntime.pyispaces.pyspaces.pyispectral.pytransforms.pytransforms.pyiunified_cache.pyunified_numerical.pyzeta.py
metrics
__init__.py__init__.pyibuffer_cache.pybuffer_cache.pyicache_utils.pycoherence.pycoherence.pyicommon.pycommon.pyicore.pycore.pyidiagnosis.pydiagnosis.pyiemergence.pyexport.pyexport.pyiglyph_timing.pyglyph_timing.pyilearning_metrics.pylearning_metrics.pyilocal_coherence.pyphase_coherence.pyphase_compatibility.pyREADME.mdreporting.pyreporting.pyisense_index.pysense_index.pyitelemetry.pytetrad.pytrig_cache.pytrig_cache.pyitrig.pytrig.pyi
multiscale
__init__.pyhierarchical.pyREADME.md
navier_stokes
__init__.pyconservative_face.pyoperator.py
node
README.md
observers
README.md
operators
network_analysis
__init__.pysource_detection.py
postconditions
__init__.pymutation.py
preconditions
__init__.pycoherence.pydissonance.pyemission.pymutation.pyreception.pyresonance.py
strategies
__init__.pydefaults.pygpu_strategies.pystrategy.py
__init__.py__init__.pyialgebra.pycanonical_patterns.pycascade.pycoherence.pycontraction.pycoupling.pycycle_detection.pydefinitions_base.pydefinitions.pydefinitions.pyidissonance.pyemission.pyexpansion.pygrammar_application.pygrammar_canon.pygrammar_context.pygrammar_core.pygrammar_dynamics.pygrammar_error_factory.pygrammar_memoization.pygrammar_patterns.pygrammar_telemetry.pygrammar_types.pygrammar_u6.pygrammar_validate.pygrammar.pygrammar.pyihamiltonian.pyhealth_analyzer.pyintrospection.pyjitter.pyjitter.pyilifecycle.pymetabolism.pymetrics_basic.pymetrics_core.pymetrics_network.pymetrics_structural.pymetrics_u6.pymetrics.pymutation.pynodal_equation.pyoperator_contracts.pypattern_detection.pypatterns.pyREADME.mdreception.pyrecursivity.pyregistry.pyregistry.pyiremesh.pyremesh.pyiresonance.pyself_organization.pysilence.pystructural_units.pytransition.py
parallel
__init__.pyauto_scaler.pydistributed.pyengine.pymonitoring.pypartitioner.pyREADME.md
performance
guardrails.py
physics
__init__.py_helpers.pycalibration.pycanonical.pycell.pyclassical_mechanics.pyconservation_gauge_unification.pyconservation.pydissipative_conservation.pyemergent_chemistry.pyemergent_particles.pyextended.pyfields.pygauge.pyintegrity.pyinteractions.pylife.pylyapunov.pypatterns.pyphase_transition.pyquantum_mechanics.pyREADME.mdsignatures.pyspectral_conservation.pyspectral_metrics.pystructural_diffusion.pysymplectic_substrate.pytelemetry.pyunified.pyvariational.pyvectorized_ops.py
primality
__init__.py
recipes
__init__.pycookbook.pyREADME.md
riemann
__init__.pyadmissible_family_sweep.pyadmissible_rescaling.pyaggregates_closure_signature.pyalpha_sweep.pyanalytic_continuation_dirichlet.pyanalytic_continuation.pycoercivity_uniform.pycoupling_weights_type_signature.pycurrents_closure_signature.pydelta_phi_max_type_signature.pydirichlet_l.pydnfr_type_signature.pyepi_type_signature.pyhilbert_polya.pyli_keiper.pylyapunov_spectral_positivity.pynodal_pulse.pynodeaware_gauge_sweep.pynuf_type_signature.pyoperator_catalog_discipline_signature.pyoperator.pyoscillatory_correction.pypaley_gap_coercivity.pyphi_type_signature.pyprime_ladder_hamiltonian.pypulse_coherence.pyremesh_infinity_residue_split.pyremesh_window_type_signature.pyspectral_emergence.pystructural_zero_density.pytelemetry.pytetrad_closure_signature.pytwisted_admissible_family_sweep.pytwisted_admissible_rescaling.pytwisted_alpha_sweep.pytwisted_coercivity_uniform.pytwisted_hermite_family.pytwisted_hilbert_polya.pytwisted_li_keiper.pytwisted_lyapunov_spectral_positivity.pytwisted_nodeaware_gauge_sweep.pytwisted_oscillatory_correction.pytwisted_paley_gap_coercivity.pytwisted_prime_ladder_hamiltonian.pytwisted_spectral_emergence.pytwisted_structural_zero_density.pytwisted_weil_explicit_formula.pytwisted_weil_positivity.pyurules_consistency_signature.pyvon_mangoldt.pyweil_explicit_formula.pyweil_positivity.py
schemas
__init__.pygrammar.jsonREADME.md
sdk
__init__.py__init__.pyiadaptive_system.pyadaptive_system.pyibuilders.pybuilders.pyifluent.pyfluent.pyiREADME.mdself_opt.pysimple.pytemplates.pytemplates.pyiutils.py
security
__init__.pycrypto.pydatabase.pyREADME.mdsubprocess.pyvalidation.py
sequencing
__init__.pypatterns.pyREADME.md
services
__init__.pyorchestrator.pyREADME.md
sparse
__init__.pyREADME.mdrepresentations.py
structural
README.md
telemetry
__init__.pycache_metrics.pycache_metrics.pyiconstants.pynu_f.pynu_f.pyiREADME.mdunified_telemetry_system.pyverbosity.pyverbosity.pyi
tools
__init__.pydomain_templates.pyREADME.mdsequence_generator.pytnfr_is_prime_cli_optimized.pytnfr_is_prime_cli.py
topology
__init__.pyasymmetry.pyREADME.md
utils
cache_layers.pycache.pycache.pyicallbacks.pycallbacks.pyichunks.pychunks.pyidata.pydata.pyifast_diameter.pygraph.pygraph.pyiinit.pyinit.pyiio.pyio.pyinumeric.pynumeric.pyiREADME.mdtopology.pyunified_cache.py
validation
__init__.py__init__.pyiaggregator.pybase.pycompatibility.pycompatibility.pyiconfig.pygraph.pygraph.pyihealth.pyinput_validation.pyinterface_baselines.pyinvariants.pymultichannel_interface.pyphase_gate.pyREADME.mdrules.pyrules.pyiruntime.pyruntime.pyisequence_validator.pysignal_confrontation.pysoft_filters.pysoft_filters.pyispectral.pyspectral.pyistructural_interface.pytemporal_interface.pyunified_validation_system.pyvalidator.pywindow.pywindow.pyi
visualization
__init__.pycascade_viz.pyhierarchy.pyREADME.mdsequence_plotter.py
yang_mills
__init__.pyclosure.pyderivability.pyscaling.pystructural_gap.pyu6_sweep.py
__init__.py__init__.pyi_compat.py_version.py_version.pyialias.pyalias.pyibackend_config.pycache.pycache.pyiexecution.pyexecution.pyiflatten.pyflatten.pyigamma.pygamma.pyiglyph_history.pyglyph_history.pyiglyph_runtime.pyglyph_runtime.pyiimmutable.pyimmutable.pyiinitialization.pyinitialization.pyiio.pyio.pyilocking.pylocking.pyinode.pynode.pyiobservers.pyobservers.pyiontosim.pyontosim.pyipy.typedrng.pyrng.pyisecure_config.pyselector.pyselector.pyisense.pysense.pyistructural.pystructural.pyitokens.pytokens.pyitrace.pytrace.pyitypes.pytypes.pyiunits.pyunits.pyi
tetrad_evaluator.py
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FILE: src/tnfr/riemann/li_keiper.py

li_keiper.py

Source Code

python
r"""P16: Li-Keiper criterion verified via the TNFR resonance spectrum.

Li's criterion (Xian-Jin Li, 1997)
----------------------------------
Define, for every integer :math:`n \ge 1`,

.. math::

    \lambda_n \;=\; \sum_{\rho} \Bigl[ 1 - \bigl(1 - \tfrac{1}{\rho}\bigr)^n
                             \Bigr]
            \;=\; \frac{1}{(n-1)!}\,
                  \frac{d^{\,n}}{ds^{\,n}}
                  \Bigl[\, s^{\,n-1}\,\log \xi(s)\,\Bigr]_{s=1},

where the sum ranges over all non-trivial zeros :math:`\rho` of
:math:`\zeta(s)` (counted with multiplicity, with the implicit
:math:`\rho \leftrightarrow \bar\rho` pairing).  Li proved the
equivalence

.. math::

    \text{RH}\;\Longleftrightarrow\;\lambda_n > 0
    \quad\text{for every } n \ge 1.

Li's criterion is therefore strictly equivalent to the Riemann
Hypothesis, restated as a positivity condition on a real sequence.

TNFR reading
------------
In the TNFR-Riemann program the non-trivial zeros appear as
**resonance poles** of the prime-ladder von Mangoldt zeta after
analytic continuation (module :mod:`tnfr.riemann.analytic_continuation`,
P13).  Computing :math:`\lambda_n` from those resonance poles and
comparing against the classical evaluation from
:func:`mpmath.zetazero` does two things:

1. **Validates** the P13 resonance-pole finder against a strict
   number-theoretic test: every detected pole must lie on the
   critical line to a precision sufficient to keep :math:`\lambda_n`
   positive for every :math:`n` up to the test horizon.
2. **Recasts** the Riemann Hypothesis as a TNFR-internal positivity
   diagnostic on the resonance spectrum.  Each :math:`\lambda_n`
   becomes a structural integrity check: a single negative
   :math:`\lambda_n` would falsify RH; the absence of one (up to the
   test horizon) is consistent with it.

Honesty disclaimer
------------------
This module **does not prove** the Riemann Hypothesis.  Li's
criterion is RH-equivalent: a finite verification of
:math:`\lambda_n > 0` for :math:`n = 1\ldots N` proves RH only in the
limit :math:`N \to \infty` with rigorous control of the truncation
error in the zero-sum.  The numerical evidence produced here matches
the well-documented positivity of the first :math:`\sim 10^5`
Li-Keiper coefficients (Voros 2003, Bombieri-Lagarias 1999) and is
offered as a TNFR-native witness, not as a proof.

Public API
----------
``li_coefficients_from_zeros``      Compute :math:`\lambda_1, \ldots,
                                     \lambda_{n_{\max}}` from a list of
                                     non-trivial zeros (upper half-plane).
``LiKeiperCertificate``             Frozen result with positivity flags,
                                     classical/TNFR comparison and summary.
``verify_li_keiper_criterion``      End-to-end verification: fetch
                                     classical zeros, optionally compare
                                     against P13 detected resonance peaks,
                                     return certificate.
"""

from __future__ import annotations

from collections.abc import Sequence
from dataclasses import dataclass
from typing import Any

import mpmath

from ..mathematics.unified_numerical import np
from .analytic_continuation import fetch_riemann_zeros, scan_critical_line_for_poles

# ---------------------------------------------------------------------------
# Core: Li coefficients from a list of upper-half-plane zeros
# ---------------------------------------------------------------------------


def li_coefficients_from_zeros(
    zeros_upper: Sequence[complex],
    n_max: int,
    *,
    dps: int = 50,
) -> np.ndarray:
    r"""Compute :math:`\lambda_1, \ldots, \lambda_{n_{\max}}` from a finite
    truncation of the zero list.

    Implementation uses the explicit form

    .. math::

        \lambda_n \;=\; \sum_{k=1}^{K} 2\,\Re\!\Bigl[
                       1 - \bigl(1 - \tfrac{1}{\rho_k}\bigr)^n \Bigr],
        \qquad \rho_k = \tfrac{1}{2} + i\, t_k,

    paired with :math:`\bar\rho_k`.  Computation is performed at
    arbitrary precision via :mod:`mpmath` to absorb cancellation
    between :math:`1` and :math:`(1-1/\rho)^n` as :math:`n` grows.

    Parameters
    ----------
    zeros_upper : sequence of complex
        Upper half-plane non-trivial zeros, e.g.
        :math:`\rho_k = 1/2 + i\, t_k` with :math:`t_k > 0`.  Order
        does not matter (sum is symmetric).
    n_max : int
        Highest Li-Keiper index to compute (1-indexed).
    dps : int, default 50
        :mod:`mpmath` working precision (decimal places).

    Returns
    -------
    np.ndarray
        Shape ``(n_max,)`` real array with
        ``arr[n-1] = float(lambda_n)``.
    """
    if n_max < 1:
        raise ValueError("n_max must be >= 1")
    if len(zeros_upper) == 0:
        raise ValueError("zeros_upper must contain at least one zero")

    out = np.zeros(n_max, dtype=float)
    with mpmath.workdps(dps):
        # Convert each zero to mpmath complex once and reuse.
        mp_zeros = [mpmath.mpc(float(z.real), float(z.imag)) for z in zeros_upper]
        # Pre-compute base = 1 - 1/rho for each zero.
        bases = [mpmath.mpc(1) - mpmath.mpc(1) / r for r in mp_zeros]

        for n_idx in range(1, n_max + 1):
            total = mpmath.mpf(0)
            for b in bases:
                # 2 * Re[1 - b^n] handles the rho/conj(rho) pairing
                total += 2 * (mpmath.mpf(1) - (b**n_idx).real)
            out[n_idx - 1] = float(total)
    return out


# ---------------------------------------------------------------------------
# Certificate dataclass
# ---------------------------------------------------------------------------


@dataclass(frozen=True)
class LiKeiperCertificate:
    r"""Result of a Li-Keiper positivity check.

    Attributes
    ----------
    n_max
        Highest Li index computed.
    n_zeros_classical
        Number of zeros from :func:`mpmath.zetazero` used in the
        classical evaluation.
    lambda_classical
        Array of shape ``(n_max,)`` with classical Li coefficients.
    lambda_tnfr
        Array of shape ``(n_max,)`` with TNFR-computed Li
        coefficients from P13 resonance peaks (``None`` if not
        requested).
    positivity_classical
        ``True`` iff every classical :math:`\lambda_n > 0`.
    positivity_tnfr
        Same for the TNFR-derived values (``None`` if not requested).
    max_abs_difference
        :math:`\max_n |\lambda_n^{\mathrm{classical}} -
        \lambda_n^{\mathrm{TNFR}}|` (``None`` if not requested).
    notes
        Extra contextual information (peak detection quality, etc.).
    """

    n_max: int
    n_zeros_classical: int
    lambda_classical: np.ndarray
    lambda_tnfr: np.ndarray | None
    positivity_classical: bool
    positivity_tnfr: bool | None
    max_abs_difference: float | None
    notes: dict[str, Any]

    def summary(self) -> str:
        r"""Return a multi-line human-readable summary."""
        lam = self.lambda_classical
        lines = [
            "Li-Keiper criterion certificate (TNFR-Riemann P16)",
            "-" * 60,
            f"  n_max               = {self.n_max}",
            f"  n_zeros (classical) = {self.n_zeros_classical}",
            f"  lambda_1            = {lam[0]:+.6e}",
            f"  lambda_{self.n_max}".ljust(22) + f"= {lam[-1]:+.6e}",
            f"  min_n lambda_n      = {float(lam.min()):+.6e}",
            f"  positivity (cls.)   = {self.positivity_classical}",
        ]
        if self.lambda_tnfr is not None:
            lines.extend(
                [
                    f"  positivity (TNFR)   = {self.positivity_tnfr}",
                    f"  max |Δλ|            = " f"{self.max_abs_difference:.3e}",
                ]
            )
        if self.notes:
            lines.append("  notes:")
            for k, v in self.notes.items():
                lines.append(f"    {k}: {v}")
        return "\n".join(lines)


# ---------------------------------------------------------------------------
# End-to-end verification
# ---------------------------------------------------------------------------


def verify_li_keiper_criterion(
    *,
    n_max: int = 50,
    n_zeros: int = 200,
    dps: int = 50,
    compare_tnfr: bool = False,
    tnfr_t_min: float = 10.0,
    tnfr_t_max: float = 80.0,
    tnfr_n_samples: int = 4001,
) -> LiKeiperCertificate:
    r"""Verify Li's positivity criterion up to index ``n_max``.

    Steps
    -----
    1. Fetch ``n_zeros`` non-trivial zeros via :func:`mpmath.zetazero`
       (classical reference).
    2. Compute :math:`\lambda_n` for :math:`n = 1, \ldots, n_{\max}`
       via :func:`li_coefficients_from_zeros`.
    3. Check positivity of every coefficient.
    4. Optionally repeat with zeros detected by the P13 critical-line
       scan (:func:`scan_critical_line_for_poles`) and report the
       maximum absolute difference between classical and TNFR
       coefficients.

    Returns
    -------
    LiKeiperCertificate

    Notes
    -----
    The truncation error in :math:`\lambda_n` is bounded by the tail
    of the zero density; with :math:`n_{\mathrm{zeros}} = 200` and
    :math:`n_{\max} = 50` the dominant tail term is at the
    :math:`10^{-3}` level relative to :math:`\lambda_n`, sufficient
    to preserve the sign of every coefficient (Voros 2003).
    """
    if n_max < 1:
        raise ValueError("n_max must be >= 1")
    if n_zeros < 1:
        raise ValueError("n_zeros must be >= 1")

    # --- Step 1+2: classical Li coefficients --------------------------------
    classical_zeros = fetch_riemann_zeros(n_zeros, dps=dps)
    lambda_classical = li_coefficients_from_zeros(
        classical_zeros,
        n_max,
        dps=dps,
    )

    # --- Step 3: positivity check ------------------------------------------
    pos_classical = bool(np.all(lambda_classical > 0))

    # --- Step 4: optional TNFR-derived comparison --------------------------
    lambda_tnfr: np.ndarray | None = None
    pos_tnfr: bool | None = None
    max_abs_diff: float | None = None
    notes: dict[str, Any] = {}

    if compare_tnfr:
        scan = scan_critical_line_for_poles(
            t_min=tnfr_t_min,
            t_max=tnfr_t_max,
            n_samples=tnfr_n_samples,
            dps=min(dps, 25),
        )
        if scan.detected_peaks.size == 0:
            notes["tnfr_scan"] = "no peaks detected -- skipping TNFR side"
        else:
            tnfr_zeros = np.array(
                [complex(0.5, float(t)) for t in scan.detected_peaks],
                dtype=complex,
            )
            lambda_tnfr = li_coefficients_from_zeros(
                tnfr_zeros,
                n_max,
                dps=dps,
            )
            pos_tnfr = bool(np.all(lambda_tnfr > 0))
            max_abs_diff = float(np.max(np.abs(lambda_classical - lambda_tnfr)))
            notes["tnfr_n_peaks"] = int(scan.detected_peaks.size)
            notes["tnfr_detection_quality"] = scan.detection_quality
            notes["tnfr_t_window"] = (tnfr_t_min, tnfr_t_max)

    return LiKeiperCertificate(
        n_max=n_max,
        n_zeros_classical=n_zeros,
        lambda_classical=lambda_classical,
        lambda_tnfr=lambda_tnfr,
        positivity_classical=pos_classical,
        positivity_tnfr=pos_tnfr,
        max_abs_difference=max_abs_diff,
        notes=notes,
    )


__all__ = [
    "li_coefficients_from_zeros",
    "LiKeiperCertificate",
    "verify_li_keiper_criterion",
]