TNFR Logo
TheoryLearnSoftwareResearch

On this page

TNFR

Resonant Fractal Nature Theory — a mathematical framework for coherent patterns on graph-coupled networks.

About
  • Project history
  • Editorial policy
  • Contact
Resources
  • GitHub
  • PyPI
  • DOI · Zenodo
Legal
  • MIT License
  • Citation
© 2026 TNFR project — MIT licensed.DOI 10.5281/zenodo.17602860
docs
grammar
PHYSICS_VERIFICATION.md
API_CONTRACTS.mdCANONICAL_OZ_SEQUENCES.mdEMPIRICAL_CONFRONTATION_EEG.mdREADME.mdSTRUCTURAL_FIELDS_TETRAD.mdSTRUCTURAL_INTERFACE_THEORY.md
theory
APPLIED_STRUCTURAL_ANALYSIS.mdCATALOG_TYPE_HYGIENE_PROGRAMME.mdDISSIPATIVE_AND_OPEN_SYSTEMS.mdEMERGENT_ONTOLOGY.mdEXTENDED_FIELDS_AND_DERIVED_QUANTITIES.mdFUNDAMENTAL_THEORY.mdGAUGE_SYMMETRY_AND_UNIFICATION.mdGLOSSARY.mdMATHEMATICAL_DYNAMICS_BASIS.mdMINIMAL_STRUCTURAL_DEGREES.mdNUCLEUS_A_PRIME_LADDER_ATLAS.mdNUCLEUS_B_EQUIVARIANCE_OBSTRUCTIONS.mdPHYSICAL_REGIME_CORRESPONDENCES.mdREADME.mdREMESH_INFINITY_DERIVATION.mdSTRUCTURAL_CONSERVATION_THEOREM.mdSTRUCTURAL_OPERATORS.mdSTRUCTURAL_STABILITY_AND_DYNAMICS.mdTNFR_BSD_RESEARCH_NOTES.mdTNFR_HODGE_RESEARCH_NOTES.mdTNFR_NAVIER_STOKES_RESEARCH_NOTES.mdTNFR_NUMBER_THEORY.mdTNFR_P_VS_NP_RESEARCH_NOTES.mdTNFR_RIEMANN_RESEARCH_NOTES.mdTNFR_VARIATIONAL_PRINCIPLE.mdTNFR_YANG_MILLS_RESEARCH_NOTES.mdTNFR.pdfUNIFIED_GRAMMAR_RULES.md
factorization-lab
analysis
analyze_patterns.pycertificate_manifest.py
benchmarks
benchmark_analysis.pybenchmark_expansion_suite.pyfull_spectrum_factorization.pypaley_gap_extended.pypaley_gap_smoke.pytest_benchmark_suite.py
demos
experiment_contexts
exp_0b1663cd19b7.jsonexp_0bf0054b7474.jsonexp_75a4c8ca616a.jsonexp_848ee0fd1857.jsonexp_f6fe00562193.jsonexp_fdf3da424e1e.json
failure_telemetry_batch.pyfeedback_integration_demo.pyintegration_demo_snapshots.dbseed_management_integration_demo.pysnapshot_integration_demo.pytrajectory_143.jsontrajectory_77.jsontrajectory_89.jsontrajectory_91.jsontrajectory_97.json
docs
FACTORING_PLAYBOOK.mdFALSE_POSITIVE_TEST_SUITE.mdOPERATOR_CERTIFICATES.mdROADMAP.mdSPECTRAL_ROUTE.md
experiment_contexts
exp_cebe1d9e7d8e.json
notebooks
spectral_history.ipynb
scripts
run_false_positive_tests.py
tests
run_false_positive_test_suite.pytest_cli.pytest_false_positive_methodology.pytest_false_positive_verifier.pytest_feedback_integration.pytest_partitioning.pytest_seed_management.pytest_self_opt_support.pytest_snapshot_system.pytest_spectral_paley.pytest_verification_robustness.py
tnfr_factorization
__init__.pyapi.pycli.pyfailure_telemetry.pyfeedback_adapter.pyfeedback_integration.pypartitioning.pyself_opt_support.pyspectral_paley.py
demo_snapshots.dbLICENSE_SNAPSHOT.mdPACKAGE_SUMMARY.mdREADME.mdseed_management.pysnapshot_system.pytest_certificate_hashing.pytest_installation.pyverification_trajectory_77.json
benchmarks
analyze_tetrad_universality.pyb0star_alpha_canonical_product_graphs.pybenchmark_optimization_tracks.pybenchmark_utils.pyboundary_vibration.pybridge_primes_riemann.pychiral_involution.pycli_utils.pycoherence_projector_sense_index.pycommutant_bridge.pycomposition_arithmetic.pyconfinement_zones_test.pyconservation_law_validation.pydirected_paley_bridge.pyemergent_arithmetic_pulse.pyemergent_atom_dynamics.pyemergent_atomic_shells.pyemergent_base_dimension.pyemergent_dimension_dynamics.pyemergent_fractal_pulse.pyemergent_fractal_simplex_dimension.pyemergent_integers_symmetry.pyemergent_musical_nfr.pyemergent_nfr_geometry.pyemergent_nfr_where.pyemergent_rationals.pyemergent_rhythm.pyemergent_screening.pyemergent_shell_cardinals.pyemergent_shell_ordering.pyemergent_simplex_dimension.pyemergent_substrate_symmetry.pyequivariance_wall.pyexternal_phase_gate_validation.pyfield_methods_battery.pygolden_residue_remesh_bridge.pyintegrated_force_regime_study.pyinverse_spectrum_to_symmetry.pyk_phi_safety_demo.pykuramoto_farey_bridge.pymissing_piece_bridge.pymultichannel_interface_benchmark.pynavier_stokes_recipe_bridge.pynodal_propagator_residue_bridge.pyns_moment_hierarchy_cascade.pyoperational_irreducibility.pypaley_bridge.pyphase_curvature_investigation.pyphase_wall.pyphi_s_confinement_investigation.pyprimes_as_consequence.pypulse_phase_coherence_budget.pyREADME.mdremesh_infinity_riemann_baseline.pyremesh_infinity_riemann_composed.pyremesh_infinity_riemann_modified_graph.pyremesh_infinity_riemann_operator.pyremesh_infinity_riemann_spectral_basis.pyremesh_infinity_riemann_spectral_robustness.pyremesh_infinity_riemann_spectral.pyresidue_phase_vs_riemann.pystructural_interface_benchmark.pytemporal_interface_benchmark.pytetrad_results_aggregate.pyu2_destabilization_irreversibility.pyuniversality_clusters.pyxi_c_fast_experiment.py
primality-test
benchmarks
comprehensive_benchmark.py
docs
ADVANCED_INTEGRATION.mdmathematical_foundation.mdperformance_analysis.md
examples
advanced_examples.pybasic_usage.py
tnfr_primality
__init__.py__main__.pyadvanced_cli.pyadvanced_core.pycli.pyconstants.pycore.pyoptimized.py
MANIFEST.inPACKAGE_SUMMARY.mdREADME.mdRELEASE_NOTES_v1.0.mdsetup.pytest_installation.py
tests
core_physics
__init__.pytest_conservation_laws.pytest_delta_nfr_computation_paths.pytest_delta_nfr.pytest_dispersion_coherence_sign_invariance.pytest_emergent_constants_guard.pytest_lyapunov_operators.pytest_nodal_equation.pytest_structural_triad.py
data
replay_manifests
sample_run
_manifest_summary.json_manifest.json_partition_files.txt.gz
self_opt_validation
seed_alpha
paley.json
seed_beta
integration.json
seed_gamma
unknown.json
self_optimization
test_run
partitioned
test_run
test_run_p0.jsontest_run_p1.json
_manifest_summary.json_manifest.json
engines
test_pattern_discovery_manifest.pytest_self_optimization_engine.py
mathematics
__init__.pytest_autodiff.pytest_backends.pytest_dissipative_dynamics.pytest_epi.pytest_factory_patterns.pytest_metrics.pytest_navier_stokes_refounded.pytest_number_theory_canonical.pytest_operators.pytest_residue_networks.pytest_riemann_nodal_pulse.pytest_riemann_pulse_coherence.pytest_spaces.pytest_transforms.pytest_validator.py
operators
test_canonical_operators_modern.pytest_grammar_canon.pytest_grammar_canonical_consistency.pytest_grammar_dynamics.pytest_operator_contracts.pytest_operator_strategies.py
parallel
test_fractal_partition_manifest.py
physics
test_conservation_gauge_unification.pytest_dissipative_conservation.pytest_emergent_chemistry.pytest_field_cache_invalidation.pytest_gauge.pytest_phase_transition.pytest_signatures.pytest_spectral_conservation.pytest_structural_diffusion.pytest_structural_integrity.pytest_symplectic_substrate.pytest_tetrad_bounds.pytest_variational.pytest_yang_mills_closure.pytest_yang_mills_derivability.pytest_yang_mills_scaling.pytest_yang_mills_structural_gap.pytest_yang_mills_u6_sweep.py
scripts
test_run_self_opt_validation.pytest_run_self_optimization.py
sdk
__init__.pytest_simple_advanced.py
__init__.pyconftest.pyREADME.mdtest_breast_cancer_phase_gate_demo.pytest_classical_mechanics.pytest_distributed_fft.pytest_external_phase_gate_validation.pytest_factorization_entrypoint.pytest_multichannel_interface.pytest_nodal_optimizer.pytest_phase_gate_api.pytest_replay_register_manifest.pytest_signal_confrontation.pytest_structural_interface_api.pytest_structural_interface_baselines.pytest_structural_interface_benchmark.pytest_temporal_interface.pytest_vectorized_coherence_length_regression.pytest_wine_quality_phase_gate_demo.pyutils.py
examples
01_foundations
01_hello_world.py02_musical_resonance.py03_network_formation.py04_operator_sequences.py05_coherence_evolution.py06_network_topologies.py07_phase_transitions.py08_emergent_phenomena.py09_visualization_suite.py10_simplified_sdk_showcase.py
02_physics_regimes
11_classical_limit_comparison.py115_operator_contract_audit.py12_classical_mechanics_demo.py13_quantum_mechanics_demo.py14_uncertainty_and_interference.py15_train_crossing_demo.py17_conservation_law_demo.py26_gauge_structure_demo.py27_variational_principle_demo.py28_dissipative_systems_demo.py29_lyapunov_stability_demo.py30_self_optimization_demo.py31_mathematical_constants_basis.py33_complex_field_unification.py34_conservation_protocol_suite.py35_tetrad_irreducibility.py36_grammar_violation_detector.py37_operator_tetrad_synergy.py38_grammar_energy_landscape.py39_nodal_equation_decomposition.py
03_riemann_zeta
157_nodal_pulse_phase_attack.py41_von_mangoldt_zeta_demo.py42_riemann_zeros_as_resonances.py43_prime_ladder_hamiltonian_demo.py44_weil_explicit_formula_demo.py45_li_keiper_demo.py46_weil_tnfr_positivity_demo.py47_alpha_sweep_demo.py48_admissible_family_sweep_demo.py49_nodeaware_gauge_sweep_demo.py50_uniform_coercivity_demo.py51_adaptive_coercivity_demo.py52_paley_gap_coercivity_demo.py53_lyapunov_spectral_positivity_demo.py54_hilbert_polya_demo.py55_structural_zero_density_demo.py56_spectral_emergence_demo.py57_admissible_rescaling_demo.py58_oscillatory_correction_demo.py
04_riemann_L_twisted
59_dirichlet_l_function_demo.py60_dirichlet_l_continuation_demo.py61_dirichlet_l_hamiltonian_demo.py62_dirichlet_weil_explicit_formula_demo.py63_dirichlet_li_keiper_demo.py64_twisted_weil_positivity_demo.py65_twisted_alpha_sweep_demo.py66_twisted_admissible_family_sweep_demo.py67_twisted_nodeaware_gauge_sweep_demo.py68_twisted_hermite_family_demo.py69_twisted_coercivity_uniform_demo.py70_twisted_paley_gap_coercivity_demo.py71_twisted_lyapunov_spectral_demo.py72_twisted_hilbert_polya_demo.py73_twisted_structural_zero_density_demo.py74_twisted_spectral_emergence_demo.py75_twisted_admissible_rescaling_demo.py76_twisted_oscillatory_correction_demo.py
05_type_hygiene
77_remesh_infinity_residue_split_demo.py78_nuf_type_signature_demo.py79_epi_type_signature_demo.py80_phi_type_signature_demo.py81_dnfr_type_signature_demo.py82_remesh_window_type_signature_demo.py83_delta_phi_max_type_signature_demo.py84_coupling_weights_type_signature_demo.py85_tetrad_closure_signature_demo.py86_currents_closure_signature_demo.py87_aggregates_closure_signature_demo.py88_urules_consistency_signature_demo.py89_operator_catalog_discipline_signature_demo.py
06_navier_stokes
158_navier_stokes_two_face_refounded.py
07_number_theory
100_prime_families_orbits.py101_numbers_as_coupled_network.py102_nodal_flow_primes_equilibria.py116_nuf_emergent_prime_visibility.py146_primality_grammatical_inertness.py147_numbers_as_free_monoid_words.py148_capacity_arm_carries_von_mangoldt.py149_p14_is_the_capacity_arm_operator.py153_structural_frequency_rank_cyclotomy.py40_arithmetic_number_theory.py94_generative_number_construction.py95_primes_from_spectral_waves.py96_spectral_vibration_of_coherence.py97_goldbach_additive_multiplicative.pyemergent_chemistry_particles_demo.py
08_emergent_geometry
103_emergent_substrate_meets_riemann.py106_per_node_polarization_geometry.py107_orthogonal_structure_emergent_geometry.py108_emergent_field_generating_structure.py112_structure_predicts_coherence_flow.py113_overdamped_projection_bridge.py114_substrate_conserved_quantities.py117_emergent_geometry_residue_graph.py118_emergent_vs_classical_operator.py119_phase_sector_directed_residue.py120_symmetry_wall_substrate_vs_spectrum.py121_canonical_symmetry_break_negative.py122_factorization_phase_sector.py123_symmetry_sector_decomposition.py124_emergent_metric_fractal_consistency.py125_node_is_the_emergent_substrate.py126_two_layers_base_fiber.py127_base_is_emergent_not_imposed.py128_base_substrate_coemergence.py129_spectral_gap_base_fiber_clock.py130_operators_break_substrate_charges.py131_coemergent_loop_convergence.py132_geometric_phase_holonomy.py133_psi_topological_defects.py134_spectral_dimension_heat_kernel.py135_arrow_of_time_h_theorem.py136_heat_kernel_coefficients.py137_synchronization_transition.py138_structure_frequency_synchronization.py139_grammar_formal_language.py140_grammar_automaton.py141_grammar_rule_decomposition.py142_grammar_operator_quotient.py143_glyphic_function_sublanguage.py144_branching_combinator.py145_syntactic_monoid_starfree.py150_emergent_grammatical_pattern_parry.py151_grammar_in_emergent_geometry.py152_operator_contract_tetrahedron.py154_conductor_annotated_qr_spectrum.py155_ontological_position_of_numbers.py156_emergence_directness_law.py98_emergent_symplectic_substrate.py99_structural_diffusion.pyunified_fields_showcase.py
09_millennium
109_p_vs_np_coherence_synthesis.py110_bsd_rank_structural_pressure.py111_hodge_discrete_and_honest_gap.py
10_applications
159_empirical_confrontation_pipeline.py90_phase_gate_monitor_demo.py91_breast_cancer_phase_gate_demo.py92_wine_quality_phase_gate_demo.py93_structural_interface_demo.pypytorch_cuda_demo.py
README.md
scripts
replay
__init__.pyregister_manifest.py
__init__.pyREADME.mdrebuild_failure_manifest.pyrun_reproducible_benchmarks.pyrun_self_opt_validation.pyrun_self_optimization.pytnfr_is_prime.pyvalidate_conservation_law.pyverify_internal_references.py
src
core
__init__.pyevaluation.py
tnfr
backends
__init__.pyjax_backend.pynumpy_backend.pyoptimized_numpy.pyREADME.mdtorch_backend.py
cli
__init__.py__init__.pyiarguments.pyarguments.pyiexecution.pyexecution.pyiinteractive_validator.pyREADME.mdutils.pyutils.pyi
compat
__init__.pydataclass.pyjsonschema_stub.pymatplotlib_stub.pynumpy_stub.pyREADME.md
config
__init__.py__init__.pyiconstants.pyconstants.pyidefaults_core.pydefaults_init.pydefaults_metric.pydefaults.pyfeature_flags.pyfeature_flags.pyiglyph_constants.pyoperator_names.pyoperator_names.pyiphysics_derivation.pyprecision_modes.pypresets.pypresets.pyiREADME.mdsecurity.pythresholds.pytnfr_config.py
constants
__init__.py__init__.pyialiases.pyaliases.pyicanonical.pymetric.pymetric.pyioperational.py
core
__init__.pycontainer.pydefault_implementations.pyexceptions.pyinterfaces.pyREADME.md
dynamics
__init__.py__init__.pyiadaptation.pyadaptation.pyiadaptive_sequences.pyadaptive_sequences.pyiadelic.pyadvanced_cache_optimizer.pyadvanced_fft_arithmetic.pyaliases.pyaliases.pyibifurcation.pycache_aware_fft_engine.pycanonical.pycanonical.pyicomputational_hub.pycoordination.pycoordination.pyidistributed_fft.pydnfr.pydnfr.pyidynamic_limits.pyemergent_centralization.pyemergent_integration_engine.pyfeedback.pyfeedback.pyifft_backend.pyfft_cache_coordinator.pyfft_dispatchers.pyfft_engine.pyfft_workers.pyfused_dnfr.pyhomeostasis.pyhomeostasis.pyiintegrators.pyintegrators.pyilearning.pylearning.pyimetabolism.pymulti_modal_cache.pynbody_tnfr.pynbody.pynodal_optimizer.pyoptimization_orchestrator.pypropagation.pyREADME.mdruntime.pyruntime.pyisampling.pysampling.pyiselectors.pyselectors.pyiself_optimizing_engine.pyspectral_structural_fusion.pystructural_cache.pystructural_clip.pysymplectic.pyunified_backend.pyunified_mathematical_cache_orchestrator.py
engines
computation
__init__.pyfft_engine.pyunified_fft_engine.pyunified_gpu_system.py
constants
__init__.pycanonical.pyoperational.py
integration
__init__.pyemergent_integration.py
pattern_discovery
__init__.pymathematical_patterns.pymulti_modal_cache.py
self_optimization
__init__.pyengine.py
__init__.pyREADME.md
errors
__init__.pycontextual.py
factorization
__init__.py
flatten
README.md
gamma
README.md
glyph_history
README.md
glyph_runtime
README.md
immutable
README.md
initialization
README.md
io
README.md
math
__init__.pyfields_symbolic.pygrammar_validators.pyoptimizer.pyREADME.mdsymbolic.py
mathematics
__init__.pybackend.pybackend.pyidynamics.pydynamics.pyiepi.pyepi.pyigenerators.pygenerators.pyiliouville.pymetrics.pymetrics.pyinumber_theory.pyoperators_factory.pyoperators_factory.pyioperators.pyoperators.pyioptimized_primality.pyprojection.pyprojection.pyiREADME.mdruntime.pyruntime.pyispaces.pyspaces.pyispectral.pytransforms.pytransforms.pyiunified_cache.pyunified_numerical.pyzeta.py
metrics
__init__.py__init__.pyibuffer_cache.pybuffer_cache.pyicache_utils.pycoherence.pycoherence.pyicommon.pycommon.pyicore.pycore.pyidiagnosis.pydiagnosis.pyiemergence.pyexport.pyexport.pyiglyph_timing.pyglyph_timing.pyilearning_metrics.pylearning_metrics.pyilocal_coherence.pyphase_coherence.pyphase_compatibility.pyREADME.mdreporting.pyreporting.pyisense_index.pysense_index.pyitelemetry.pytetrad.pytrig_cache.pytrig_cache.pyitrig.pytrig.pyi
multiscale
__init__.pyhierarchical.pyREADME.md
navier_stokes
__init__.pyconservative_face.pyoperator.py
node
README.md
observers
README.md
operators
network_analysis
__init__.pysource_detection.py
postconditions
__init__.pymutation.py
preconditions
__init__.pycoherence.pydissonance.pyemission.pymutation.pyreception.pyresonance.py
strategies
__init__.pydefaults.pygpu_strategies.pystrategy.py
__init__.py__init__.pyialgebra.pycanonical_patterns.pycascade.pycoherence.pycontraction.pycoupling.pycycle_detection.pydefinitions_base.pydefinitions.pydefinitions.pyidissonance.pyemission.pyexpansion.pygrammar_application.pygrammar_canon.pygrammar_context.pygrammar_core.pygrammar_dynamics.pygrammar_error_factory.pygrammar_memoization.pygrammar_patterns.pygrammar_telemetry.pygrammar_types.pygrammar_u6.pygrammar_validate.pygrammar.pygrammar.pyihamiltonian.pyhealth_analyzer.pyintrospection.pyjitter.pyjitter.pyilifecycle.pymetabolism.pymetrics_basic.pymetrics_core.pymetrics_network.pymetrics_structural.pymetrics_u6.pymetrics.pymutation.pynodal_equation.pyoperator_contracts.pypattern_detection.pypatterns.pyREADME.mdreception.pyrecursivity.pyregistry.pyregistry.pyiremesh.pyremesh.pyiresonance.pyself_organization.pysilence.pystructural_units.pytransition.py
parallel
__init__.pyauto_scaler.pydistributed.pyengine.pymonitoring.pypartitioner.pyREADME.md
performance
guardrails.py
physics
__init__.py_helpers.pycalibration.pycanonical.pycell.pyclassical_mechanics.pyconservation_gauge_unification.pyconservation.pydissipative_conservation.pyemergent_chemistry.pyemergent_particles.pyextended.pyfields.pygauge.pyintegrity.pyinteractions.pylife.pylyapunov.pypatterns.pyphase_transition.pyquantum_mechanics.pyREADME.mdsignatures.pyspectral_conservation.pyspectral_metrics.pystructural_diffusion.pysymplectic_substrate.pytelemetry.pyunified.pyvariational.pyvectorized_ops.py
primality
__init__.py
recipes
__init__.pycookbook.pyREADME.md
riemann
__init__.pyadmissible_family_sweep.pyadmissible_rescaling.pyaggregates_closure_signature.pyalpha_sweep.pyanalytic_continuation_dirichlet.pyanalytic_continuation.pycoercivity_uniform.pycoupling_weights_type_signature.pycurrents_closure_signature.pydelta_phi_max_type_signature.pydirichlet_l.pydnfr_type_signature.pyepi_type_signature.pyhilbert_polya.pyli_keiper.pylyapunov_spectral_positivity.pynodal_pulse.pynodeaware_gauge_sweep.pynuf_type_signature.pyoperator_catalog_discipline_signature.pyoperator.pyoscillatory_correction.pypaley_gap_coercivity.pyphi_type_signature.pyprime_ladder_hamiltonian.pypulse_coherence.pyremesh_infinity_residue_split.pyremesh_window_type_signature.pyspectral_emergence.pystructural_zero_density.pytelemetry.pytetrad_closure_signature.pytwisted_admissible_family_sweep.pytwisted_admissible_rescaling.pytwisted_alpha_sweep.pytwisted_coercivity_uniform.pytwisted_hermite_family.pytwisted_hilbert_polya.pytwisted_li_keiper.pytwisted_lyapunov_spectral_positivity.pytwisted_nodeaware_gauge_sweep.pytwisted_oscillatory_correction.pytwisted_paley_gap_coercivity.pytwisted_prime_ladder_hamiltonian.pytwisted_spectral_emergence.pytwisted_structural_zero_density.pytwisted_weil_explicit_formula.pytwisted_weil_positivity.pyurules_consistency_signature.pyvon_mangoldt.pyweil_explicit_formula.pyweil_positivity.py
schemas
__init__.pygrammar.jsonREADME.md
sdk
__init__.py__init__.pyiadaptive_system.pyadaptive_system.pyibuilders.pybuilders.pyifluent.pyfluent.pyiREADME.mdself_opt.pysimple.pytemplates.pytemplates.pyiutils.py
security
__init__.pycrypto.pydatabase.pyREADME.mdsubprocess.pyvalidation.py
sequencing
__init__.pypatterns.pyREADME.md
services
__init__.pyorchestrator.pyREADME.md
sparse
__init__.pyREADME.mdrepresentations.py
structural
README.md
telemetry
__init__.pycache_metrics.pycache_metrics.pyiconstants.pynu_f.pynu_f.pyiREADME.mdunified_telemetry_system.pyverbosity.pyverbosity.pyi
tools
__init__.pydomain_templates.pyREADME.mdsequence_generator.pytnfr_is_prime_cli_optimized.pytnfr_is_prime_cli.py
topology
__init__.pyasymmetry.pyREADME.md
utils
cache_layers.pycache.pycache.pyicallbacks.pycallbacks.pyichunks.pychunks.pyidata.pydata.pyifast_diameter.pygraph.pygraph.pyiinit.pyinit.pyiio.pyio.pyinumeric.pynumeric.pyiREADME.mdtopology.pyunified_cache.py
validation
__init__.py__init__.pyiaggregator.pybase.pycompatibility.pycompatibility.pyiconfig.pygraph.pygraph.pyihealth.pyinput_validation.pyinterface_baselines.pyinvariants.pymultichannel_interface.pyphase_gate.pyREADME.mdrules.pyrules.pyiruntime.pyruntime.pyisequence_validator.pysignal_confrontation.pysoft_filters.pysoft_filters.pyispectral.pyspectral.pyistructural_interface.pytemporal_interface.pyunified_validation_system.pyvalidator.pywindow.pywindow.pyi
visualization
__init__.pycascade_viz.pyhierarchy.pyREADME.mdsequence_plotter.py
yang_mills
__init__.pyclosure.pyderivability.pyscaling.pystructural_gap.pyu6_sweep.py
__init__.py__init__.pyi_compat.py_version.py_version.pyialias.pyalias.pyibackend_config.pycache.pycache.pyiexecution.pyexecution.pyiflatten.pyflatten.pyigamma.pygamma.pyiglyph_history.pyglyph_history.pyiglyph_runtime.pyglyph_runtime.pyiimmutable.pyimmutable.pyiinitialization.pyinitialization.pyiio.pyio.pyilocking.pylocking.pyinode.pynode.pyiobservers.pyobservers.pyiontosim.pyontosim.pyipy.typedrng.pyrng.pyisecure_config.pyselector.pyselector.pyisense.pysense.pyistructural.pystructural.pyitokens.pytokens.pyitrace.pytrace.pyitypes.pytypes.pyiunits.pyunits.pyi
tetrad_evaluator.py
.pre-commit-config.yaml.semgrep.yaml.zenodo.jsonARCHITECTURE.mdbandit.yamlCHANGELOG.mdCITATION.cffCONTRIBUTING.mdEMERGENT_CANON_AUDIT.mdEMERGENT_DERIVATION_PLAN.mdLICENSE.mdMakefileMANIFEST.inpyproject.tomlpyrightconfig.jsonPYTORCH_CUDA_INTEGRATION.mdREADME.mdSECURITY.mdTESTING.mdTNFR_Website_Content_Brief.md
FILE: src/tnfr/utils/unified_cache.py

unified_cache.py

TNFR Unified Cache System - Consolidated Memory Management.

CONSOLIDATION ACHIEVEMENT: This module unifies caching strategies across TNFR codebase under a single coherent interface with monitoring and policies.

Unified Architecture:

  • Centralized cache manager with named regions
  • Consistent LRU eviction policies
  • Memory usage monitoring and limits
  • Unified hit/miss statistics
  • Thread-safe operations

Theoretical Foundation: Efficient caching preserves computational coherence by minimizing redundant reorganization (ΔNFR) calculations, analogous to structural memory (ξ_C) persistence in the nodal equation.

Consolidates:

  • Ad-hoc caching in validation/telemetry systems
  • Legacy cache implementations in utils/cache.py (interface wrapper)
  • Scattered memoization decorators

Status: UNIFIED CACHE CONSOLIDATION

Source Code

python
"""TNFR Unified Cache System - Consolidated Memory Management.

CONSOLIDATION ACHIEVEMENT: This module unifies caching strategies across
TNFR codebase under a single coherent interface with monitoring and policies.

Unified Architecture:
- Centralized cache manager with named regions
- Consistent LRU eviction policies
- Memory usage monitoring and limits
- Unified hit/miss statistics
- Thread-safe operations

Theoretical Foundation:
Efficient caching preserves computational coherence by minimizing redundant
reorganization (ΔNFR) calculations, analogous to structural memory (ξ_C)
persistence in the nodal equation.

Consolidates:
- Ad-hoc caching in validation/telemetry systems
- Legacy cache implementations in utils/cache.py (interface wrapper)
- Scattered memoization decorators

Status: UNIFIED CACHE CONSOLIDATION
"""

from __future__ import annotations

import logging
import threading
import time
from collections import OrderedDict
from collections.abc import Callable, Iterable, Iterator, MutableMapping
from typing import TYPE_CHECKING, Any, Generic, TypeVar, cast

from ..types import CacheLevel, CacheStats

if TYPE_CHECKING:
    from .cache import CacheManager


# Lazy import wrapper to avoid circular dependencies with utils.cache
def cache_tnfr_computation(*args: Any, **kwargs: Any) -> Any:
    """Unified cache decorator that delegates to the robust implementation in utils.cache."""
    from .cache import cache_tnfr_computation as real_impl

    return real_impl(*args, **kwargs)


logger = logging.getLogger(__name__)

__all__ = [
    "CacheLevel",
    "cache_tnfr_computation",
    "TNFRUnifiedCacheSystem",
    "UnifiedLRUCache",
    "CacheStats",
]

K = TypeVar("K")
V = TypeVar("V")


def _normalise_callbacks(
    callbacks: Iterable[Callable[[K, V], None]] | Callable[[K, V], None] | None,
) -> tuple[Callable[[K, V], None], ...]:
    if callbacks is None:
        return ()
    if callable(callbacks):
        return (callbacks,)
    return tuple(callbacks)


class UnifiedLRUCache(MutableMapping[K, V], Generic[K, V]):
    """Thread-safe LRU Cache implementation for TNFR unified systems.

    Features:
    - Thread-safe operations (RLock)
    - LRU eviction policy
    - Telemetry and eviction callbacks
    - Integration with CacheManager (optional)
    - External lock synchronization
    """

    def __init__(
        self,
        maxsize: int = 1000,
        name: str = "default",
        manager: CacheManager | None = None,
        metrics_key: str | None = None,
        eviction_callbacks: (
            Iterable[Callable[[K, V], None]] | Callable[[K, V], None] | None
        ) = None,
        telemetry_callbacks: (
            Iterable[Callable[[K, V], None]] | Callable[[K, V], None] | None
        ) = None,
        locks: MutableMapping[K, Any] | None = None,
        getsizeof: Callable[[V], int] | None = None,
        count_overwrite_hit: bool = True,
    ) -> None:
        self.maxsize = maxsize
        self.name = name
        self._manager = manager
        self._metrics_key = metrics_key
        self._locks = locks
        self._getsizeof = getsizeof
        self._count_overwrite_hit = count_overwrite_hit
        self._currsize = 0

        self._cache: OrderedDict[K, V] = OrderedDict()
        self._lock = threading.RLock()
        self._stats = CacheStats(max_size=maxsize)

        self._eviction_callbacks = list(_normalise_callbacks(eviction_callbacks))
        self._telemetry_callbacks = list(_normalise_callbacks(telemetry_callbacks))

    @property
    def telemetry_callbacks(self) -> tuple[Callable[[K, V], None], ...]:
        """Return currently registered telemetry callbacks."""
        with self._lock:
            return tuple(self._telemetry_callbacks)

    @property
    def eviction_callbacks(self) -> tuple[Callable[[K, V], None], ...]:
        """Return currently registered eviction callbacks."""
        with self._lock:
            return tuple(self._eviction_callbacks)

    def set_telemetry_callbacks(
        self,
        callbacks: Iterable[Callable[[K, V], None]] | Callable[[K, V], None] | None,
        *,
        append: bool = False,
    ) -> None:
        """Update telemetry callbacks executed on removals."""
        with self._lock:
            new_callbacks = list(_normalise_callbacks(callbacks))
            if append:
                self._telemetry_callbacks.extend(new_callbacks)
            else:
                self._telemetry_callbacks = new_callbacks

    def set_eviction_callbacks(
        self,
        callbacks: Iterable[Callable[[K, V], None]] | Callable[[K, V], None] | None,
        *,
        append: bool = False,
    ) -> None:
        """Update eviction callbacks executed on removals."""
        with self._lock:
            new_callbacks = list(_normalise_callbacks(callbacks))
            if append:
                self._eviction_callbacks.extend(new_callbacks)
            else:
                self._eviction_callbacks = new_callbacks

    def __getitem__(self, key: K) -> V:
        with self._lock:
            if key in self._cache:
                self._cache.move_to_end(key)
                self._stats.hits += 1
                if self._manager and self._metrics_key:
                    self._manager.increment_hit(self._metrics_key)
                return self._cache[key]

            self._stats.misses += 1
            if self._manager and self._metrics_key:
                self._manager.increment_miss(self._metrics_key)
            raise KeyError(key)

    def __setitem__(self, key: K, value: V) -> None:
        with self._lock:
            size = self._getsizeof(value) if self._getsizeof else 1

            if key in self._cache:
                old_value = self._cache[key]
                old_size = self._getsizeof(old_value) if self._getsizeof else 1
                self._currsize -= old_size
                self._cache.move_to_end(key)
                self._cache[key] = value
                self._currsize += size

                if self._count_overwrite_hit:
                    self._stats.hits += 1
                    if self._manager and self._metrics_key:
                        self._manager.increment_hit(self._metrics_key)
            else:
                self._cache[key] = value
                self._currsize += size
                self._stats.size += 1

            # Evict if full
            while self._currsize > self.maxsize:
                self.popitem()

    def __delitem__(self, key: K) -> None:
        with self._lock:
            value = self._cache.pop(key)
            size = self._getsizeof(value) if self._getsizeof else 1
            self._currsize -= size
            self._stats.size -= 1
            self._dispatch_removal(key, value)

    def __iter__(self) -> Iterator[K]:
        with self._lock:
            return iter(list(self._cache))

    def __len__(self) -> int:
        with self._lock:
            return len(self._cache)

    @property
    def currsize(self) -> int:
        """Return current size (items or weighted)."""
        with self._lock:
            return self._currsize

    def popitem(self) -> tuple[K, V]:
        """Remove and return the (key, value) pair least recently used."""
        with self._lock:
            # last=False pops FIFO (least recently used in OrderedDict)
            key, value = self._cache.popitem(last=False)
            size = self._getsizeof(value) if self._getsizeof else 1
            self._currsize -= size
            self._stats.size -= 1
            self._stats.evictions += 1

            if self._manager and self._metrics_key:
                self._manager.increment_eviction(self._metrics_key)

            self._dispatch_removal(key, value)
            return key, value

    def _dispatch_removal(self, key: K, value: V) -> None:
        """Handle cleanup/callbacks for removed items."""
        # Lock cleanup
        if self._locks is not None:
            try:
                self._locks.pop(key, None)
            except Exception:
                logger.exception("lock cleanup failed for %r", key)

        # Telemetry callbacks
        for callback in self._telemetry_callbacks:
            try:
                callback(key, value)
            except Exception:
                logger.exception("telemetry callback failed for %r", key)

        # Eviction callbacks
        for callback in self._eviction_callbacks:
            try:
                callback(key, value)
            except Exception:
                logger.exception("eviction callback failed for %r", key)

    def get(self, key: K, default: Any = None) -> Any:
        try:
            return self[key]
        except KeyError:
            return default

    def put(self, key: K, value: V) -> None:
        self[key] = value

    def clear(self) -> None:
        """Clear cache."""
        with self._lock:
            self._cache.clear()
            self._stats.size = 0
            # Don't reset hits/misses for historical stats

    def get_stats(self) -> CacheStats:
        """Get cache statistics."""
        with self._lock:
            # Return copy
            return CacheStats(
                hits=self._stats.hits,
                misses=self._stats.misses,
                evictions=self._stats.evictions,
                size=self._stats.size,
                max_size=self.maxsize,
                timings=self._stats.timings,
                total_time=self._stats.total_time,
            )


class TNFRUnifiedCacheSystem:
    """Unified Cache System - Centralized Memory Management.

    ARCHITECTURE: Provides named cache regions for different TNFR subsystems
    (validation, telemetry, computation) with unified monitoring.

    Usage:
        # Get global system
        cache_sys = get_unified_cache_system()

        # Get or create a region
        val_cache = cache_sys.get_region("validation", max_size=5000)

        # Use cache
        val_cache.put("key", result)
        item = val_cache.get("key")
    """

    def __init__(self) -> None:
        self._regions: dict[str, UnifiedLRUCache] = {}
        self._lock = threading.RLock()
        self._global_stats = {"start_time": time.time()}

        logger.info("Initialized unified cache system")

    def get_region(self, name: str, max_size: int = 1000) -> UnifiedLRUCache:
        """Get or create a named cache region."""
        with self._lock:
            if name not in self._regions:
                self._regions[name] = UnifiedLRUCache(maxsize=max_size, name=name)
                logger.debug(f"Created cache region '{name}' with size {max_size}")
            return self._regions[name]

    def clear_all(self) -> None:
        """Clear all cache regions."""
        with self._lock:
            for region in self._regions.values():
                region.clear()
            logger.info("Cleared all unified cache regions")

    def get_system_stats(self) -> dict[str, Any]:
        """Get aggregated statistics for all regions."""
        with self._lock:
            stats: dict[str, Any] = {
                "regions": {},
                "total_hits": 0,
                "total_misses": 0,
                "total_evictions": 0,
                "total_items": 0,
                "uptime": time.time() - cast(float, self._global_stats["start_time"]),
            }

            for name, region in self._regions.items():
                r_stats = region.get_stats()
                stats["regions"][name] = {
                    "hits": r_stats.hits,
                    "misses": r_stats.misses,
                    "hit_rate": r_stats.hit_rate,
                    "size": r_stats.size,
                    "max_size": r_stats.max_size,
                }
                stats["total_hits"] += r_stats.hits
                stats["total_misses"] += r_stats.misses
                stats["total_evictions"] += r_stats.evictions
                stats["total_items"] += r_stats.size

            total_reqs = stats["total_hits"] + stats["total_misses"]
            stats["global_hit_rate"] = (
                (stats["total_hits"] / total_reqs) if total_reqs > 0 else 0.0
            )

            return stats


# ============================================================================
# PUBLIC API
# ============================================================================

_unified_cache_system: TNFRUnifiedCacheSystem | None = None


def get_unified_cache_system() -> TNFRUnifiedCacheSystem:
    """Get global unified cache system instance."""
    global _unified_cache_system
    if _unified_cache_system is None:
        _unified_cache_system = TNFRUnifiedCacheSystem()
    return _unified_cache_system


def get_cache_region(name: str, max_size: int = 1000) -> UnifiedLRUCache:
    """Get a named cache region - convenience function."""
    return get_unified_cache_system().get_region(name, max_size)


def clear_unified_caches() -> None:
    """Clear all unified caches - convenience function."""
    if _unified_cache_system:
        _unified_cache_system.clear_all()